repo stringlengths 2 99 | file stringlengths 13 225 | code stringlengths 0 18.3M | file_length int64 0 18.3M | avg_line_length float64 0 1.36M | max_line_length int64 0 4.26M | extension_type stringclasses 1
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gecco-2022 | gecco-2022-main/AND-XOR/DynamicalMatrix.py | #!/usr/bin/env python3
# -*- coding: utf-8 -*-
"""
Created on Tue Oct 10 22:09:09 2017
@author: Hightoutou
"""
def DM_mass(N, x0, y0, D0, m0, L):
import numpy as np
Lx = L[0]
Ly = L[1]
M = np.zeros((2*N, 2*N))
contactNum = 0
for i in range(N):
for j in range(i):
... | 12,537 | 30.423559 | 104 | py |
gecco-2022 | gecco-2022-main/AND-XOR/ConfigPlot.py | #!/usr/bin/env python3
# -*- coding: utf-8 -*-
"""
Created on Tue Oct 10 21:01:26 2017
@author: Hightoutou
"""
import numpy as np
def ConfigPlot_DiffSize(N, x, y, D, L, mark_print):
import matplotlib.pyplot as plt
from matplotlib.patches import Ellipse
Dmin = min(D)
fig, ax = plt.subplots(subplo... | 22,835 | 29.488652 | 117 | py |
gecco-2022 | gecco-2022-main/AND-XOR/MOO2.py | # multi-objective optimization to evolve AND and XOR gates in the same material
# imports for DEAP
import time, array, random, copy, math
import numpy as np
from deap import algorithms, base, benchmarks, tools, creator
import matplotlib.pyplot as plt
import seaborn
#seaborn.set(style='whitegrid')
import pandas as pd
... | 12,452 | 35.626471 | 248 | py |
gecco-2022 | gecco-2022-main/AND-XOR/MOO.py | # multi-objective optimization to evolve AND and XOR gates in the same material
# imports for DEAP
import time, array, random, copy, math
import numpy as np
from deap import algorithms, base, benchmarks, tools, creator
import matplotlib.pyplot as plt
import seaborn
#seaborn.set(style='whitegrid')
import pandas as pd
... | 15,147 | 35.501205 | 248 | py |
gecco-2022 | gecco-2022-main/AND-XOR/plotMOO3.py | ## plot stuff after loading everything from the pickled files for MOO
import time, array, random, copy, math
import numpy as np
from deap import algorithms, base, benchmarks, tools, creator
import matplotlib.pyplot as plt
import seaborn
import pandas as pd
import random
import pickle
from os.path import exists
import ... | 11,771 | 36.730769 | 248 | py |
gecco-2022 | gecco-2022-main/AND-XOR/plot_functions.py | #!/usr/bin/env python3
# -*- coding: utf-8 -*-
"""
Created on Sun Oct 22 14:48:04 2017
@author: Hightoutou
"""
import matplotlib.pyplot as plt
#import matplotlib
#matplotlib.use('TkAgg')
def Line_single(xdata, ydata, line_spec, xlabel, ylabel, mark_print, fn = '', xscale='linear', yscale='linear'):
fig, ax1 = plt... | 2,062 | 33.966102 | 112 | py |
gecco-2022 | gecco-2022-main/AND-XOR/FFT_functions.py | #!/usr/bin/env python3
# -*- coding: utf-8 -*-
"""
Created on Tue Oct 17 15:10:21 2017
@author: Hightoutou
"""
import numpy as np
import matplotlib.pyplot as plt
from plot_functions import Line_multi, Line_single
#from numba import jit
def FFT_Fup(Nt, F, dt, Freq_Vibr):
sampling_rate = 1/dt
t = np.arange(Nt... | 3,487 | 25.225564 | 152 | py |
gecco-2022 | gecco-2022-main/AND-XOR/plotMOO.py | ## plot stuff after loading everything from the pickled files for MOO
import time, array, random, copy, math
import numpy as np
from deap import algorithms, base, benchmarks, tools, creator
import matplotlib.pyplot as plt
import seaborn
import pandas as pd
import random
import pickle
from os.path import exists
import ... | 51,850 | 38.281061 | 267 | py |
gecco-2022 | gecco-2022-main/RandomSearch/AND-NESS/switch_binary.py | import numpy as np
from ConfigPlot import ConfigPlot_EigenMode_DiffMass, ConfigPlot_YFixed_rec, ConfigPlot_DiffMass_SP
from MD_functions import MD_VibrSP_ConstV_Yfixed_DiffK
from MD_functions import FIRE_YFixed_ConstV_DiffK
from DynamicalMatrix import DM_mass_DiffK_Yfixed
from plot_functions import Line_single, Line_m... | 14,736 | 36.594388 | 252 | py |
gecco-2022 | gecco-2022-main/RandomSearch/AND-NESS/MD_functions.py | #!/usr/bin/env python3
# -*- coding: utf-8 -*-
"""
Created on Fri Oct 13 13:09:27 2017
@author: Hightoutou
"""
import numpy as np
import time
#from numba import jit
from FFT_functions import FFT_Fup, FFT_vCorr
from plot_functions import Line_multi, Line_yy, Line_single
from ConfigPlot import ConfigPlot_YFixed_rec
imp... | 133,858 | 30.675106 | 178 | py |
gecco-2022 | gecco-2022-main/RandomSearch/AND-NESS/constants.py | # number of runs
RUNS = 3
worstFitness = +1000000
# population size
popSize = 50
# number of generations
numGenerations = 200
| 129 | 10.818182 | 23 | py |
gecco-2022 | gecco-2022-main/RandomSearch/AND-NESS/afpo_seed_binary.py | import constants as c
import copy
import numpy as np
import operator
import statistics
import pickle
from joblib import Parallel, delayed
import multiprocessing
from genome_seed_binary import GENOME
class AFPO:
def __init__(self,randomSeed):
self.randomSeed = randomSeed
self.currentGene... | 5,048 | 30.955696 | 112 | py |
gecco-2022 | gecco-2022-main/RandomSearch/AND-NESS/DynamicalMatrix.py | #!/usr/bin/env python3
# -*- coding: utf-8 -*-
"""
Created on Tue Oct 10 22:09:09 2017
@author: Hightoutou
"""
def DM_mass(N, x0, y0, D0, m0, L):
import numpy as np
Lx = L[0]
Ly = L[1]
M = np.zeros((2*N, 2*N))
contactNum = 0
for i in range(N):
for j in range(i):
... | 12,537 | 30.423559 | 104 | py |
gecco-2022 | gecco-2022-main/RandomSearch/AND-NESS/ConfigPlot.py | #!/usr/bin/env python3
# -*- coding: utf-8 -*-
"""
Created on Tue Oct 10 21:01:26 2017
@author: Hightoutou
"""
import numpy as np
def ConfigPlot_DiffSize(N, x, y, D, L, mark_print):
import matplotlib.pyplot as plt
from matplotlib.patches import Ellipse
Dmin = min(D)
fig, ax = plt.subplots(subplo... | 22,835 | 29.488652 | 117 | py |
gecco-2022 | gecco-2022-main/RandomSearch/AND-NESS/genome_seed_binary.py | import constants as c
from individual_seed_binary import INDIVIDUAL
import pickle
class GENOME:
def __init__(self,ID,fitness=c.worstFitness):
self.Set_ID(ID)
self.indv = INDIVIDUAL(ID)
self.age = 0
self.fitness = fitness
def Age(self):
self.age = self.age + 1
def ... | 2,336 | 24.681319 | 74 | py |
gecco-2022 | gecco-2022-main/RandomSearch/AND-NESS/afpoPlots_seed_binary.py | import pickle
import matplotlib.pyplot as plt
from switch_binary import switch
import constants as c
import numpy
runs = c.RUNS
gens = c.numGenerations
fitnesses = numpy.zeros([runs, gens])
temp = []
individuals = []
with open('savedRobotsAfpoSeed.dat', "rb") as f:
for r in range(1, runs+1):
for g in range... | 2,217 | 28.972973 | 103 | py |
gecco-2022 | gecco-2022-main/RandomSearch/AND-NESS/evolveAfpo_seed_binary.py | from afpo_seed_binary import AFPO
import os
import constants as c
import random
#cleaning up the data files
try:
os.remove("savedRobotsLastGenAfpoSeed.dat")
except OSError:
pass
try:
os.remove("avgFitnessAfpoSeed.dat")
except OSError:
pass
try:
os.remove("savedRobotsAfpoSeed.dat")
except OSError:
... | 616 | 18.28125 | 82 | py |
gecco-2022 | gecco-2022-main/RandomSearch/AND-NESS/individual_seed_binary.py | from switch_binary import switch
import constants as c
import random
import math
import numpy as np
import sys
import pickle
class INDIVIDUAL:
def __init__(self, i):
# assuming curves have one control point, [Sx, Ex, Cx, Cy] for each fiber
# assuming we have two planes, each with c.FIBERS of fibers... | 1,936 | 35.54717 | 190 | py |
gecco-2022 | gecco-2022-main/RandomSearch/AND-NESS/randomSearch2.py | from switch_binary import switch
import matplotlib.pyplot as plt
import random
import numpy as np
from joblib import Parallel, delayed
import multiprocessing
import pickle
from scipy.stats import norm
import operator
from ConfigPlot import ConfigPlot_DiffStiffness3
with open('outs.dat', "rb") as f:
outs = pickle.l... | 3,115 | 24.966667 | 138 | py |
gecco-2022 | gecco-2022-main/RandomSearch/AND-NESS/plot_functions.py | #!/usr/bin/env python3
# -*- coding: utf-8 -*-
"""
Created on Sun Oct 22 14:48:04 2017
@author: Hightoutou
"""
import matplotlib.pyplot as plt
#import matplotlib
#matplotlib.use('TkAgg')
def Line_single(xdata, ydata, line_spec, xlabel, ylabel, mark_print, fn = '', xscale='linear', yscale='linear'):
fig, ax1 = plt... | 2,062 | 33.966102 | 112 | py |
gecco-2022 | gecco-2022-main/RandomSearch/AND-NESS/FFT_functions.py | #!/usr/bin/env python3
# -*- coding: utf-8 -*-
"""
Created on Tue Oct 17 15:10:21 2017
@author: Hightoutou
"""
import numpy as np
import matplotlib.pyplot as plt
from plot_functions import Line_multi, Line_single
#from numba import jit
def FFT_Fup(Nt, F, dt, Freq_Vibr):
sampling_rate = 1/dt
t = np.arange(Nt... | 3,487 | 25.225564 | 152 | py |
gecco-2022 | gecco-2022-main/RandomSearch/AND-NESS/randomSearch.py | from switch_binary import switch
import matplotlib.pyplot as plt
import random
import numpy as np
from joblib import Parallel, delayed
import multiprocessing
import pickle
m1 = 1
m2 = 10
N = 30
N_light = 9
samples = []
print("sampling", flush=True)
for i in range(0, 5001):
samples.append(np.random.randint(low=0,... | 978 | 21.767442 | 112 | py |
gecco-2022 | gecco-2022-main/RandomSearch/AND-NESS/plotInOut.py | import constants as c
import numpy as np
from ConfigPlot import ConfigPlot_DiffStiffness2
from MD_functions import MD_VibrSP_ConstV_Yfixed_DiffK, FIRE_YFixed_ConstV_DiffK, MD_VibrSP_ConstV_Yfixed_DiffK2
from DynamicalMatrix import DM_mass_DiffK_Yfixed
import random
import matplotlib.pyplot as plt
import pickle
from os.... | 13,392 | 35.997238 | 248 | py |
gecco-2022 | gecco-2022-main/RandomSearch/XOR-NESS/switch_binary.py | import numpy as np
from ConfigPlot import ConfigPlot_EigenMode_DiffMass, ConfigPlot_YFixed_rec, ConfigPlot_DiffMass_SP
from MD_functions import MD_VibrSP_ConstV_Yfixed_DiffK
from MD_functions import FIRE_YFixed_ConstV_DiffK
from DynamicalMatrix import DM_mass_DiffK_Yfixed
from plot_functions import Line_single, Line_m... | 14,724 | 36.563776 | 252 | py |
gecco-2022 | gecco-2022-main/RandomSearch/XOR-NESS/MD_functions.py | #!/usr/bin/env python3
# -*- coding: utf-8 -*-
"""
Created on Fri Oct 13 13:09:27 2017
@author: Hightoutou
"""
import numpy as np
import time
#from numba import jit
from FFT_functions import FFT_Fup, FFT_vCorr
from plot_functions import Line_multi, Line_yy, Line_single
from ConfigPlot import ConfigPlot_YFixed_rec
imp... | 133,858 | 30.675106 | 178 | py |
gecco-2022 | gecco-2022-main/RandomSearch/XOR-NESS/constants.py | # number of runs
RUNS = 3
worstFitness = +1000000
# population size
popSize = 50
# number of generations
numGenerations = 200
| 129 | 10.818182 | 23 | py |
gecco-2022 | gecco-2022-main/RandomSearch/XOR-NESS/afpo_seed_binary.py | import constants as c
import copy
import numpy as np
import operator
import statistics
import pickle
from joblib import Parallel, delayed
import multiprocessing
from genome_seed_binary import GENOME
class AFPO:
def __init__(self,randomSeed):
self.randomSeed = randomSeed
self.currentGene... | 5,048 | 30.955696 | 112 | py |
gecco-2022 | gecco-2022-main/RandomSearch/XOR-NESS/DynamicalMatrix.py | #!/usr/bin/env python3
# -*- coding: utf-8 -*-
"""
Created on Tue Oct 10 22:09:09 2017
@author: Hightoutou
"""
def DM_mass(N, x0, y0, D0, m0, L):
import numpy as np
Lx = L[0]
Ly = L[1]
M = np.zeros((2*N, 2*N))
contactNum = 0
for i in range(N):
for j in range(i):
... | 12,537 | 30.423559 | 104 | py |
gecco-2022 | gecco-2022-main/RandomSearch/XOR-NESS/ConfigPlot.py | #!/usr/bin/env python3
# -*- coding: utf-8 -*-
"""
Created on Tue Oct 10 21:01:26 2017
@author: Hightoutou
"""
import numpy as np
def ConfigPlot_DiffSize(N, x, y, D, L, mark_print):
import matplotlib.pyplot as plt
from matplotlib.patches import Ellipse
Dmin = min(D)
fig, ax = plt.subplots(subplo... | 22,835 | 29.488652 | 117 | py |
gecco-2022 | gecco-2022-main/RandomSearch/XOR-NESS/genome_seed_binary.py | import constants as c
from individual_seed_binary import INDIVIDUAL
import pickle
class GENOME:
def __init__(self,ID,fitness=c.worstFitness):
self.Set_ID(ID)
self.indv = INDIVIDUAL(ID)
self.age = 0
self.fitness = fitness
def Age(self):
self.age = self.age + 1
def ... | 2,336 | 24.681319 | 74 | py |
gecco-2022 | gecco-2022-main/RandomSearch/XOR-NESS/afpoPlots_seed_binary.py | import pickle
import matplotlib.pyplot as plt
from switch_binary import switch
import constants as c
import numpy
runs = c.RUNS
gens = c.numGenerations
fitnesses = numpy.zeros([runs, gens])
temp = []
individuals = []
with open('savedRobotsAfpoSeed.dat', "rb") as f:
for r in range(1, runs+1):
for g in range... | 2,217 | 28.972973 | 103 | py |
gecco-2022 | gecco-2022-main/RandomSearch/XOR-NESS/evolveAfpo_seed_binary.py | from afpo_seed_binary import AFPO
import os
import constants as c
import random
#cleaning up the data files
try:
os.remove("savedRobotsLastGenAfpoSeed.dat")
except OSError:
pass
try:
os.remove("avgFitnessAfpoSeed.dat")
except OSError:
pass
try:
os.remove("savedRobotsAfpoSeed.dat")
except OSError:
... | 616 | 18.28125 | 82 | py |
gecco-2022 | gecco-2022-main/RandomSearch/XOR-NESS/individual_seed_binary.py | from switch_binary import switch
import constants as c
import random
import math
import numpy as np
import sys
import pickle
class INDIVIDUAL:
def __init__(self, i):
# assuming curves have one control point, [Sx, Ex, Cx, Cy] for each fiber
# assuming we have two planes, each with c.FIBERS of fibers... | 1,936 | 35.54717 | 190 | py |
gecco-2022 | gecco-2022-main/RandomSearch/XOR-NESS/randomSearch2.py | from switch_binary import switch
import matplotlib.pyplot as plt
import random
import numpy as np
from joblib import Parallel, delayed
import multiprocessing
import pickle
from scipy.stats import norm
import operator
from ConfigPlot import ConfigPlot_DiffStiffness3
with open('outs.dat', "rb") as f:
outs = pickle.l... | 3,171 | 25 | 138 | py |
gecco-2022 | gecco-2022-main/RandomSearch/XOR-NESS/plot_functions.py | #!/usr/bin/env python3
# -*- coding: utf-8 -*-
"""
Created on Sun Oct 22 14:48:04 2017
@author: Hightoutou
"""
import matplotlib.pyplot as plt
#import matplotlib
#matplotlib.use('TkAgg')
def Line_single(xdata, ydata, line_spec, xlabel, ylabel, mark_print, fn = '', xscale='linear', yscale='linear'):
fig, ax1 = plt... | 2,062 | 33.966102 | 112 | py |
gecco-2022 | gecco-2022-main/RandomSearch/XOR-NESS/FFT_functions.py | #!/usr/bin/env python3
# -*- coding: utf-8 -*-
"""
Created on Tue Oct 17 15:10:21 2017
@author: Hightoutou
"""
import numpy as np
import matplotlib.pyplot as plt
from plot_functions import Line_multi, Line_single
#from numba import jit
def FFT_Fup(Nt, F, dt, Freq_Vibr):
sampling_rate = 1/dt
t = np.arange(Nt... | 3,487 | 25.225564 | 152 | py |
gecco-2022 | gecco-2022-main/RandomSearch/XOR-NESS/randomSearch.py | from switch_binary import switch
import matplotlib.pyplot as plt
import random
import numpy as np
from joblib import Parallel, delayed
import multiprocessing
import pickle
m1 = 1
m2 = 10
N = 30
N_light = 9
samples = []
print("sampling", flush=True)
for i in range(0, 5001):
samples.append(np.random.randint(low=0,... | 978 | 21.767442 | 112 | py |
gecco-2022 | gecco-2022-main/RandomSearch/XOR-NESS/plotInOut.py | import constants as c
import numpy as np
from ConfigPlot import ConfigPlot_DiffStiffness2
from MD_functions import MD_VibrSP_ConstV_Yfixed_DiffK, FIRE_YFixed_ConstV_DiffK, MD_VibrSP_ConstV_Yfixed_DiffK2
from DynamicalMatrix import DM_mass_DiffK_Yfixed
import random
import matplotlib.pyplot as plt
import pickle
from os.... | 13,392 | 35.997238 | 248 | py |
python-urx | python-urx-master/setup.py | from setuptools import setup
setup(
name="urx",
version="0.11.0",
description="Python library to control an UR robot",
author="Olivier Roulet-Dubonnet",
author_email="olivier.roulet@gmail.com",
url='https://github.com/oroulet/python-urx',
packages=["urx"],
provides=["urx"],
install_... | 778 | 32.869565 | 71 | py |
python-urx | python-urx-master/make_deb.py | #!/usr/bin/python3
"""
hackish file to crreate deb from setup.py
"""
import subprocess
from email.utils import formatdate
import urx
DEBVERSION = urx.__version__
branch = subprocess.check_output("git rev-parse --abbrev-ref HEAD", shell=True)
branch = branch.decode()
branch = branch.strip()
branch = str(branch).repl... | 1,478 | 24.947368 | 119 | py |
python-urx | python-urx-master/release.py | import re
import os
def bump_version():
with open("setup.py") as f:
s = f.read()
m = re.search(r'version="(.*)\.(.*)\.(.*)",', s)
v1, v2, v3 = m.groups()
oldv = "{0}.{1}.{2}".format(v1, v2, v3)
newv = "{0}.{1}.{2}".format(v1, v2, str(int(v3) + 1))
print("Current version is: {0}, write ... | 1,197 | 27.52381 | 84 | py |
python-urx | python-urx-master/tools/find_packet.py | from urx import ursecmon
if __name__ == "__main__":
f = open("packets.bin", "rb")
s = open("packet.bin", "wb")
data = f.read(99999)
parser = ursecmon.ParserUtils()
p, rest = parser.find_first_packet(data)
print(len(p))
p, rest = parser.find_first_packet(rest)
print(len(p))
s.write(p... | 385 | 24.733333 | 44 | py |
python-urx | python-urx-master/tools/grabber.py | import socket
import sys
if __name__ == "__main__":
host, port = "localhost", 30002
host, port = "192.168.1.8", 30002
if len(sys.argv) > 1:
host = sys.argv[1]
sock = socket.create_connection((host, port))
f = open("packets.bin", "wb")
try:
# Connect to server and send data
... | 500 | 19.875 | 49 | py |
python-urx | python-urx-master/tools/get_rob.py | #!/usr/bin/env python
import sys
import logging
from math import pi
from IPython import embed
from urx import Robot
import math3d
if __name__ == "__main__":
if len(sys.argv) > 1:
host = sys.argv[1]
else:
host = 'localhost'
try:
robot = Robot(host)
r = robot
embed()
... | 389 | 15.956522 | 28 | py |
python-urx | python-urx-master/tools/fakerobot.py | import socket
import threading
import socketserver
import time
class RequestHandler(socketserver.BaseRequestHandler):
#def __init__(self, *args, **kwargs):
#print(self, *args, **kwargs)
#print("Got connection from {}".format( self.client_address[0]) )
#socketserver.BaseRequestHandler.__init... | 2,177 | 28.432432 | 95 | py |
python-urx | python-urx-master/examples/test_movep.py | import time
import urx
import logging
if __name__ == "__main__":
rob = urx.Robot("192.168.1.6")
try:
l = 0.1
v = 0.07
a = 0.1
r = 0.05
pose = rob.getl()
pose[2] += l
rob.movep(pose, acc=a, vel=v, radius=r, wait=False)
while True:
p =... | 914 | 21.317073 | 59 | py |
python-urx | python-urx-master/examples/get_robot.py | import urx
from IPython import embed
import logging
if __name__ == "__main__":
try:
logging.basicConfig(level=logging.INFO)
#robot = urx.Robot("192.168.1.6")
robot = urx.Robot("192.168.1.100")
#robot = urx.Robot("localhost")
r = robot
print("Robot object is available... | 388 | 23.3125 | 56 | py |
python-urx | python-urx-master/examples/simple.py |
import urx
import logging
if __name__ == "__main__":
logging.basicConfig(level=logging.WARN)
rob = urx.Robot("192.168.1.100")
#rob = urx.Robot("localhost")
rob.set_tcp((0,0,0,0,0,0))
rob.set_payload(0.5, (0,0,0))
try:
l = 0.05
v = 0.05
a = 0.3
pose = rob.getl()... | 775 | 25.758621 | 64 | py |
python-urx | python-urx-master/examples/get_realtime_data.py | import urx
import time
import logging
r = urx.Robot("192.168.111.134", use_rt=True, urFirm=5.1)
if __name__ == "__main__":
logging.basicConfig(level=logging.INFO)
while 1:
try:
j_temp = r.get_joint_temperature()
j_voltage = r.get_joint_voltage()
j_current = r.get_jo... | 1,035 | 23.093023 | 67 | py |
python-urx | python-urx-master/examples/matrices.py | from math import pi
import urx
import logging
if __name__ == "__main__":
rob = urx.Robot("192.168.1.100")
#rob = urx.Robot("localhost")
rob.set_tcp((0,0,0,0,0,0))
rob.set_payload(0.5, (0,0,0))
try:
l = 0.05
v = 0.05
a = 0.3
j = rob.getj()
print("Initial join... | 937 | 23.051282 | 56 | py |
python-urx | python-urx-master/examples/spnav_control.py | from __future__ import division
import spnav
import time
import math3d as m3d
from math import pi
import urx
class Cmd(object):
def __init__(self):
self.reset()
def reset(self):
self.x = 0
self.y = 0
self.z = 0
self.rx = 0
self.ry = 0
self.rz = 0
... | 2,806 | 28.547368 | 76 | py |
python-urx | python-urx-master/examples/joystick_control.py | """
example program to control a universal robot with a joystick
All joysticks are differens, so you will need to modify the script to work with your joystick
"""
import time
import pygame
import math3d as m3d
from math import pi
import urx
class Cmd(object):
def __init__(self):
self.reset()
def r... | 4,580 | 31.721429 | 147 | py |
python-urx | python-urx-master/examples/test_all.py | """
Testing script that runs many of the urx methods, while attempting to keep robot pose around its starting pose
"""
from math import pi
import time
import sys
import urx
import logging
if sys.version_info[0] < 3: # support python v2
input = raw_input
def wait():
if do_wait:
print("Click enter to... | 2,420 | 24.484211 | 110 | py |
python-urx | python-urx-master/docs/conf.py | # -*- coding: utf-8 -*-
#
# Python URx documentation build configuration file, created by
# sphinx-quickstart on Mon May 11 21:37:43 2015.
#
# This file is execfile()d with the current directory set to its
# containing dir.
#
# Note that not all possible configuration values are present in this
# autogenerated file.
#
... | 9,300 | 31.183391 | 79 | py |
python-urx | python-urx-master/urx/urrtmon.py | '''
Module for implementing a UR controller real-time monitor over socket port 30003.
Confer http://support.universal-robots.com/Technical/RealTimeClientInterface
Note: The packet lenght given in the web-page is 740. What is actually received from the controller is 692.
It is assumed that the motor currents, the last ... | 14,305 | 34.410891 | 124 | py |
python-urx | python-urx-master/urx/robot.py | """
Python library to control an UR robot through its TCP/IP interface
DOC LINK
http://support.universal-robots.com/URRobot/RemoteAccess
"""
import math3d as m3d
import numpy as np
from urx.urrobot import URRobot
__author__ = "Olivier Roulet-Dubonnet"
__copyright__ = "Copyright 2011-2016, Sintef Raufoss Manufacturi... | 11,388 | 29.94837 | 127 | py |
python-urx | python-urx-master/urx/robotiq_two_finger_gripper.py | #! /usr/bin/env python
"""
Python library to control Robotiq Two Finger Gripper connected to UR robot via
Python-URX
Tested using a UR5 Version CB3 and Robotiq 2-Finger Gripper Version 85
SETUP
You must install the driver first and then power on the gripper from the
gripper UI. The driver can be found here:
http:/... | 6,377 | 28.391705 | 86 | py |
python-urx | python-urx-master/urx/__init__.py | """
Python library to control an UR robot through its TCP/IP interface
"""
from urx.urrobot import RobotException, URRobot # noqa
__version__ = "0.11.0"
try:
from urx.robot import Robot
except ImportError as ex:
print("Exception while importing math3d base robot, disabling use of matrices", ex)
Robot = U... | 327 | 24.230769 | 87 | py |
python-urx | python-urx-master/urx/urscript.py | #! /usr/bin/env python
import logging
# Controller Settings
CONTROLLER_PORTS = [0, 1]
CONTROLLER_VOLTAGE = [
0, # 0-5V
2, # 0-10V
]
# Tool Settings
TOOL_PORTS = [2, 3]
TOOL_VOLTAGE = [
0, # 0-5V
1, # 0-10V
2, # 4-20mA
]
OUTPUT_DOMAIN_VOLTAGE = [
0, # 4-20mA
1, # 0-10V
]
class U... | 4,900 | 30.216561 | 103 | py |
python-urx | python-urx-master/urx/urrobot.py | """
Python library to control an UR robot through its TCP/IP interface
Documentation from universal robots:
http://support.universal-robots.com/URRobot/RemoteAccess
"""
import logging
import numbers
try:
from collections.abc import Sequence
except ImportError:
from collections import Sequence
from urx import... | 20,532 | 35.086116 | 231 | py |
python-urx | python-urx-master/urx/ursecmon.py | """
This file contains 2 classes:
- ParseUtils containing utilies to parse data from UR robot
- SecondaryMonitor, a class opening a socket to the robot and with methods to
access data and send programs to the robot
Both use data from the secondary port of the URRobot.
Only the last connected socket ... | 20,776 | 45.795045 | 443 | py |
CANTM | CANTM-main/updateTopics_covid.py | import sys
from GateMIcateLib import ModelUltiUpdateCAtopic as ModelUlti
from GateMIcateLib import BatchIterBert, DictionaryProcess
from GateMIcateLib.batchPostProcessors import bowBertBatchProcessor as batchPostProcessor
from GateMIcateLib import ScholarPostProcessor as ReaderPostProcessor
from GateMIcateLib.readers i... | 3,093 | 37.675 | 175 | py |
CANTM | CANTM-main/getPerpare.py | import os
import torch
from transformers import *
import nltk
from pathlib import Path
nltk.download('stopwords')
nltk.download('punkt')
model = BertModel.from_pretrained('bert-base-uncased')
tokenizer = BertTokenizer.from_pretrained('bert-base-uncased')
script_path = os.path.abspath(__file__)
print(script_path)
par... | 753 | 25 | 62 | py |
CANTM | CANTM-main/raw2folds.py | import json
import os
import sys
import random
import math
from pathlib import Path
import copy
def outputChunk(output_dir, chunkIdx, chunks):
output_path = os.path.join(output_dir, str(chunkIdx))
path = Path(output_path)
path.mkdir(parents=True, exist_ok=True)
for i, item in enumerate(chunks):
... | 1,062 | 22.108696 | 67 | py |
CANTM | CANTM-main/evaluation.py | import argparse
import json
import os
from GateMIcateLib import EvaluationManager
if __name__ == "__main__":
parser = argparse.ArgumentParser()
parser.add_argument("trainReaderargs", help="args for train reader")
parser.add_argument("--testReaderargs", help="args for test reader")
parser.add_argument("... | 3,273 | 42.653333 | 121 | py |
CANTM | CANTM-main/updateTopics.py | import sys
from GateMIcateLib import ModelUltiUpdateCAtopic as ModelUlti
from GateMIcateLib import BatchIterBert, DictionaryProcess
from GateMIcateLib.batchPostProcessors import bowBertBatchProcessor as batchPostProcessor
from GateMIcateLib import ScholarPostProcessor as ReaderPostProcessor
from GateMIcateLib.readers i... | 2,718 | 38.405797 | 175 | py |
CANTM | CANTM-main/wvCovidData/update_wv_unique_id.py | import json
import re
import nltk
import argparse
import copy
import os
import sys
script_path = os.path.abspath(__file__)
print(script_path)
global parent
parent = os.path.dirname(script_path)
print(parent)
gatePython = os.path.join(parent, 'GATEpythonInterface')
sys.path.append(gatePython)
from GateInterface import *... | 902 | 19.066667 | 62 | py |
CANTM | CANTM-main/wvCovidData/downloadIFCNSource.py | import sys
from bs4 import BeautifulSoup
import json
from selenium import webdriver
from selenium.webdriver.firefox.options import Options
def download_source(url):
options = Options()
options.headless = True
driver = webdriver.Firefox(options=options)
driver.get(url)
html = driver.page_source
... | 1,648 | 29.537037 | 116 | py |
CANTM | CANTM-main/wvCovidData/update_label.py | import json
import re
import nltk
import argparse
import copy
import os
import sys
script_path = os.path.abspath(__file__)
print(script_path)
global parent
parent = os.path.dirname(script_path)
print(parent)
gatePython = os.path.join(parent, 'GATEpythonInterface')
sys.path.append(gatePython)
from GateInterface import *... | 1,941 | 30.322581 | 361 | py |
CANTM | CANTM-main/wvCovidData/update_type_media.py | import json
import re
import nltk
import argparse
import copy
import os
import sys
script_path = os.path.abspath(__file__)
print(script_path)
global parent
parent = os.path.dirname(script_path)
print(parent)
gatePython = os.path.join(parent, 'GATEpythonInterface')
sys.path.append(gatePython)
from GateInterface import *... | 9,461 | 33.786765 | 115 | py |
CANTM | CANTM-main/wvCovidData/mergeAnnos.py | import sys
from WvLibs import WVdataIter
import re
from itertools import combinations
import argparse
import json
import logging
global logger
class Wv_loger:
def __init__(self, logging_level):
self.logger = logging.getLogger('root')
if logging_level == 'info':
self.logger.setLevel(log... | 10,180 | 33.986254 | 332 | py |
CANTM | CANTM-main/wvCovidData/update_website.py | import json
import re
import nltk
import sys
import string
import copy
class MediaTypeOrg:
def __init__(self):
punct_chars = list(set(string.punctuation)-set("_"))
print(punct_chars)
punctuation = ''.join(punct_chars)
self.replace = re.compile('[%s]' % re.escape(punctuation))
... | 3,918 | 30.352 | 127 | py |
CANTM | CANTM-main/wvCovidData/getData.py | import wget
import os
import zipfile
script_path = os.path.abspath(__file__)
print(script_path)
parent = os.path.dirname(script_path)
print(parent)
data_url = 'https://gate.ac.uk/g8/page/show/2/gatewiki/cow/covid19catedata/covidCateData.zip'
wget.download(data_url, parent)
zip_path = os.path.join(parent, 'covidCateD... | 411 | 21.888889 | 93 | py |
CANTM | CANTM-main/wvCovidData/WvLibs/WVdataIter.py | from .DataReader import DataReader
import random
def disagreementSolver(annotations, local_logger=None):
mergeMethodList = ['single_annotation', 'all_agreement', 'majority_agreement', 'majority_confidence', 'highest_confidence']
mergeMethod = None
annotation_list = []
label_list = []
annotator_list... | 5,834 | 36.403846 | 171 | py |
CANTM | CANTM-main/wvCovidData/WvLibs/__init__.py | from .DataReader import DataReader
from .WVdataIter import WVdataIter
| 70 | 22.666667 | 34 | py |
CANTM | CANTM-main/wvCovidData/WvLibs/DataReader.py | import json
import glob
import os
import re
import hashlib
import logging
import sys
class DataReader:
def __init__(self, annoed_json_dir, raw_json_dir, kwargs):
self._read_input_options(kwargs)
print('label ignored: ', self.ignoreLabelList)
print('user ignored: ', self.ignoreUserList)
... | 7,530 | 39.058511 | 107 | py |
CANTM | CANTM-main/wvCovidData/GATEpythonInterface/example.py | from GateInterface import *
#initialise gate
gate= GateInterFace()
# path to gate interface, for my case is /Users/xingyi/Gate/gateCodes/pythonInferface
# this will open java tcp server (on port 7899) to execute GATE operation
#gate.init('/Users/xingyi/Gate/gateCodes/pythonInferface')
gate.init('./')
# load documen... | 2,298 | 28.101266 | 106 | py |
CANTM | CANTM-main/wvCovidData/GATEpythonInterface/GateInterface/GateInterface.py | import socket
import json
import re
import os
import subprocess
import time
import signal
import pathlib
class MyEncoder(json.JSONEncoder):
def default(self, obj):
if isinstance(obj, np.integer):
return int(obj)
elif isinstance(obj, np.floating):
return float(obj)
e... | 22,190 | 34.335987 | 160 | py |
CANTM | CANTM-main/wvCovidData/GATEpythonInterface/GateInterface/__init__.py | from .GateInterface import GateInterFace, AnnotationSet, Annotation, Node, GateDocument, GatePipeline, GateCorpus
| 115 | 37.666667 | 113 | py |
CANTM | CANTM-main/GateMIcateLib/modelUltiClassTopic.py | import torch
import torch.nn as nn
import torch.optim as optim
import torch.nn.functional as F
import numpy as np
import copy
import os
from pathlib import Path
import pickle
import datetime
from .modelUlti import modelUlti
class ModelUltiClass(modelUlti):
def __init__(self, net=None, gpu=False, load_path=None):
... | 11,148 | 37.711806 | 270 | py |
CANTM | CANTM-main/GateMIcateLib/PostprocessorBase.py | import nltk
from nltk.corpus import stopwords
import os
import re
class ReaderPostProcessorBase:
def __init__(self,
keep_case=False,
label2id=True,
config=None,
word2id=False,
exteralWord2idFunction=None,
return_mask=False,
remo... | 4,597 | 29.25 | 173 | py |
CANTM | CANTM-main/GateMIcateLib/modelUltiUpdateCATopic.py | import torch
import torch.nn as nn
import torch.optim as optim
import torch.nn.functional as F
import numpy as np
import copy
import os
from pathlib import Path
import pickle
from .modelUltiClassTopic import ModelUltiClass
class ModelUltiUpdateCAtopic(ModelUltiClass):
def __init__(self, net=None, gpu=False, load_p... | 2,399 | 31 | 125 | py |
CANTM | CANTM-main/GateMIcateLib/batchPostProcessors.py | import torch
def xonlyBatchProcessor(x, y):
ss = [s[1] for s in x]
return ss[0]
def bowBertBatchProcessor(raw_x, y):
x = [s[0] for s in raw_x]
idded_words = [s[1] for s in raw_x]
y_class = y
return torch.tensor(x), torch.tensor(idded_words), torch.tensor(y_class)
def xyOnlyBertBatchProcessor... | 508 | 21.130435 | 76 | py |
CANTM | CANTM-main/GateMIcateLib/modelUltiVAEtm_noatt.py | import torch
import torch.nn as nn
import torch.optim as optim
import torch.nn.functional as F
import numpy as np
import copy
import os
from pathlib import Path
from .modelUlti import modelUlti
class ModelUltiVAEtmNOatt(modelUlti):
def __init__(self, net=None, gpu=False):
super().__init__(net=net, gpu=gpu)... | 6,838 | 38.304598 | 138 | py |
CANTM | CANTM-main/GateMIcateLib/ScholarPostProcessor.py | import nltk
from nltk.corpus import stopwords
import os
import re
from .WVPostProcessor import WVPostProcessor
from transformers import BertTokenizer
import glob
import string
from collections import Counter
from nltk.tokenize import sent_tokenize
punct_chars = list(set(string.punctuation) - set("'"))
punct_chars.s... | 7,529 | 34.023256 | 191 | py |
CANTM | CANTM-main/GateMIcateLib/BatchIter.py | import math
import random
class BatchIterBert:
def __init__(self, dataIter, batch_size=32, filling_last_batch=False, postProcessor=None):
self.dataIter = dataIter
self.batch_size = batch_size
self.num_batches = self._get_num_batches()
self.filling_last_batch = filling_last_batch
... | 2,508 | 31.166667 | 101 | py |
CANTM | CANTM-main/GateMIcateLib/DictionaryProcess.py | class DictionaryProcess:
def __init__(self, common_dictionary):
self.common_dictionary = common_dictionary
self.num_vocab = len(self.common_dictionary)
def doc2bow(self, input_doc):
gensim_bow_doc = self.common_dictionary.doc2bow(input_doc)
return gensim_bow_doc
def doc2cou... | 734 | 29.625 | 66 | py |
CANTM | CANTM-main/GateMIcateLib/ScholarProcessor.py | import nltk
from nltk.corpus import stopwords
import os
import re
from .PostprocessorBase import ReaderPostProcessorBase
from transformers import BertTokenizer
def tokenize(text, strip_html=False, lower=True, keep_emails=False, keep_at_mentions=False, keep_numbers=False, keep_alphanum=False, min_length=3, stopwords=N... | 4,509 | 35.370968 | 175 | py |
CANTM | CANTM-main/GateMIcateLib/__init__.py | from .BatchIter import BatchIterBert
from .DictionaryProcess import DictionaryProcess
from .WVPostProcessor import WVPostProcessor
from .ScholarPostProcessor import ScholarPostProcessor
from .modelUltiClassTopic import ModelUltiClass
from .modelUlti import modelUlti as ModelUlti
from .EvaluationManager import Evaluatio... | 388 | 42.222222 | 58 | py |
CANTM | CANTM-main/GateMIcateLib/modelUlti.py | import torch
import torch.nn as nn
import torch.optim as optim
import torch.nn.functional as F
import numpy as np
import os
from pathlib import Path
class modelUlti:
def __init__(self, net=None, gpu=False):
if net:
self.net = net
self.gpu = gpu
if self.gpu and net:
s... | 8,968 | 35.02008 | 126 | py |
CANTM | CANTM-main/GateMIcateLib/EvaluationManager.py | import sys
import nltk
import math
from GateMIcateLib import BatchIterBert, DictionaryProcess
#from GateMIcateLib import WVPostProcessor as ReaderPostProcessor
from configobj import ConfigObj
import torch
import argparse
import copy
from sklearn.model_selection import KFold
import random
import os
from pathlib import P... | 20,370 | 42.342553 | 208 | py |
CANTM | CANTM-main/GateMIcateLib/WVPostProcessor.py | import nltk
from nltk.corpus import stopwords
import os
import re
from .PostprocessorBase import ReaderPostProcessorBase
from transformers import BertTokenizer
class WVPostProcessor(ReaderPostProcessorBase):
def __init__(self, x_fields=['Claim', 'Explaination'], y_field='category', **kwargs):
super().__in... | 2,216 | 37.894737 | 155 | py |
CANTM | CANTM-main/GateMIcateLib/models/CLSAW_TopicModel_simple_loss.py | import torch
from torch import nn
from torch.nn import init
from torch.nn import functional as F
import math
from .miscLayer import BERT_Embedding, WVHidden, WVClassifier, Identity, Topics, kld, CLSAW_TopicModel_Base
class CLSAW_TopicModelSL(CLSAW_TopicModel_Base):
def __init__(self, config, vocab_dim=None):
... | 6,776 | 35.435484 | 150 | py |
CANTM | CANTM-main/GateMIcateLib/models/CLSAW_TopicModel.py | import torch
from torch import nn
from torch.nn import init
from torch.nn import functional as F
import math
from .miscLayer import BERT_Embedding, WVHidden, WVClassifier, Identity, Topics, kld, CLSAW_TopicModel_Base
class CLSAW_TopicModel(CLSAW_TopicModel_Base):
def __init__(self, config, vocab_dim=None):
... | 7,541 | 35.434783 | 150 | py |
CANTM | CANTM-main/GateMIcateLib/models/CLSAW_TopicModelBertEnrich.py | import torch
from torch import nn
from torch.nn import init
from torch.nn import functional as F
import math
from .miscLayer import BERT_Embedding, WVHidden, WVClassifier, Identity, Topics, kld, CLSAW_TopicModel_Base
class CLSAW_TopicModel_BERTEN(CLSAW_TopicModel_Base):
def __init__(self, config, vocab_dim=None):... | 7,008 | 34.760204 | 150 | py |
CANTM | CANTM-main/GateMIcateLib/models/miscLayer.py | from transformers import BertModel
import math
import os
import torch.nn.functional as F
import torch
import torch.nn as nn
class SingleHeadAttention(nn.Module):
def __init__(self, d_model, d_output, dropout = 0.1):
super().__init__()
self.q = nn.Parameter(torch.randn([d_output, 1]).float())
... | 9,182 | 29.407285 | 103 | py |
CANTM | CANTM-main/GateMIcateLib/models/CLSAW_TopicModel_linear.py | import torch
from torch import nn
from torch.nn import init
from torch.nn import functional as F
import math
from .miscLayer import BERT_Embedding, WVHidden, WVClassifier, Identity, Topics, kld, CLSAW_TopicModel_Base
class CLSAW_TopicModel(CLSAW_TopicModel_Base):
def __init__(self, config, vocab_dim=None):
... | 6,843 | 35.795699 | 150 | py |
CANTM | CANTM-main/GateMIcateLib/models/bertSimple.py | from transformers import BertModel
from .miscLayer import BERT_Embedding, CLSAW_TopicModel_Base, WVHidden
import os
import torch.nn.functional as F
import torch
import torch.nn as nn
class BERT_Simple(CLSAW_TopicModel_Base):
def __init__(self, config, **kwargs):
super().__init__(config=config)
se... | 1,100 | 25.853659 | 71 | py |
CANTM | CANTM-main/GateMIcateLib/models/bertPure.py | from transformers import BertModel
from .miscLayer import BERT_Embedding, CLSAW_TopicModel_Base, WVHidden
import os
import torch.nn.functional as F
import torch
import torch.nn as nn
class BERT_Simple(CLSAW_TopicModel_Base):
def __init__(self, config, **kwargs):
super().__init__(config=config)
se... | 1,102 | 25.902439 | 72 | py |
CANTM | CANTM-main/GateMIcateLib/models/NVDM.py | import torch
from torch import nn
from torch.nn import init
from torch.nn import functional as F
import math
from .miscLayer import BERT_Embedding, WVHidden, WVClassifier, Identity, Topics, kld, CLSAW_TopicModel_Base
class NVDM(CLSAW_TopicModel_Base):
def __init__(self, config, vocab_dim=None):
super().__... | 3,804 | 31.801724 | 117 | py |
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