code stringlengths 51 2.34k | sequence stringlengths 186 3.94k | docstring stringlengths 11 171 |
|---|---|---|
def load_config(configfile):
try:
with open(configfile, 'r') as ymlfile:
try:
config = yaml.load(ymlfile)
return config
except yaml.parser.ParserError:
raise PyYAMLConfigError(
'Could not parse config file: {}'.forma... | module function_definition identifier parameters identifier block try_statement block with_statement with_clause with_item as_pattern call identifier argument_list identifier string string_start string_content string_end as_pattern_target identifier block try_statement block expression_statement assignment identifier c... | Return a dict with configuration from the supplied yaml file |
def http_call(self, url=None, **kwargs):
if not url:
url = self.search_url
http_func, arg_name = self.get_http_method_arg_name()
_kwargs = {
arg_name: kwargs,
}
response = http_func(
url=url.format(**kwargs),
headers=self.get_http_h... | module function_definition identifier parameters identifier default_parameter identifier none dictionary_splat_pattern identifier block if_statement not_operator identifier block expression_statement assignment identifier attribute identifier identifier expression_statement assignment pattern_list identifier identifier... | Call the target URL via HTTP and return the JSON result |
def metadataContributer(self):
if self._metaFL is None:
fl = FeatureService(url=self._metadataURL,
proxy_url=self._proxy_url,
proxy_port=self._proxy_port)
self._metaFS = fl
return self._metaFS | module function_definition identifier parameters identifier block if_statement comparison_operator attribute identifier identifier none block expression_statement assignment identifier call identifier argument_list keyword_argument identifier attribute identifier identifier keyword_argument identifier attribute identif... | gets the metadata featurelayer object |
def shared_atts(self):
atts = {}
first = self.chunks[0]
for att in sorted(first.atts):
if all(fs.atts.get(att, '???') == first.atts[att] for fs in self.chunks if len(fs) > 0):
atts[att] = first.atts[att]
return atts | module function_definition identifier parameters identifier block expression_statement assignment identifier dictionary expression_statement assignment identifier subscript attribute identifier identifier integer for_statement identifier call identifier argument_list attribute identifier identifier block if_statement c... | Gets atts shared among all nonzero length component Chunk |
def copy(self, *args, **kwargs):
for slot in self.__slots__:
attr = getattr(self, slot)
if slot[0] == '_':
slot = slot[1:]
if slot not in kwargs:
kwargs[slot] = attr
result = type(self)(*args, **kwargs)
return result | module function_definition identifier parameters identifier list_splat_pattern identifier dictionary_splat_pattern identifier block for_statement identifier attribute identifier identifier block expression_statement assignment identifier call identifier argument_list identifier identifier if_statement comparison_operat... | Copy this model element and contained elements if they exist. |
def _build_codes() -> Dict[str, Dict[str, str]]:
built = {
'fore': {},
'back': {},
'style': {},
}
for name, number in _namemap:
built['fore'][name] = codeformat(30 + number)
built['back'][name] = codeformat(40 + number)
litename = 'light{}'.format(name)
... | module function_definition identifier parameters type generic_type identifier type_parameter type identifier type generic_type identifier type_parameter type identifier type identifier block expression_statement assignment identifier dictionary pair string string_start string_content string_end dictionary pair string s... | Build code map, encapsulated to reduce module-level globals. |
def _vcf_info(start, end, mate_id, info=None):
out = "SVTYPE=BND;MATEID={mate};IMPRECISE;CIPOS=0,{size}".format(
mate=mate_id, size=end-start)
if info is not None:
extra_info = ";".join("{0}={1}".format(k, v) for k, v in info.iteritems())
out = "{0};{1}".format(out, extra_info)
retur... | module function_definition identifier parameters identifier identifier identifier default_parameter identifier none block expression_statement assignment identifier call attribute string string_start string_content string_end identifier argument_list keyword_argument identifier identifier keyword_argument identifier bi... | Return breakend information line with mate and imprecise location. |
def _write_bed_header(self):
final_byte = 1 if self._bed_format == "SNP-major" else 0
self._bed.write(bytearray((108, 27, final_byte))) | module function_definition identifier parameters identifier block expression_statement assignment identifier conditional_expression integer comparison_operator attribute identifier identifier string string_start string_content string_end integer expression_statement call attribute attribute identifier identifier identi... | Writes the BED first 3 bytes. |
def vsh(cmd, *args, **kw):
args = '" "'.join(i.replace('"', r'\"') for i in args)
easy.sh('"%s" "%s"' % (venv_bin(cmd), args)) | module function_definition identifier parameters identifier list_splat_pattern identifier dictionary_splat_pattern identifier block expression_statement assignment identifier call attribute string string_start string_content string_end identifier generator_expression call attribute identifier identifier argument_list s... | Execute a command installed into the active virtualenv. |
def map_package(shutit_pexpect_session, package, install_type):
if package in PACKAGE_MAP.keys():
for itype in PACKAGE_MAP[package].keys():
if itype == install_type:
ret = PACKAGE_MAP[package][install_type]
if isinstance(ret,str):
return ret
if callable(ret):
ret(shutit_pexpect_session)
... | module function_definition identifier parameters identifier identifier identifier block if_statement comparison_operator identifier call attribute identifier identifier argument_list block for_statement identifier call attribute subscript identifier identifier identifier argument_list block if_statement comparison_oper... | If package mapping exists, then return it, else return package. |
def git_ls_tree(repo_dir, treeish='HEAD'):
command = ['git', 'ls-tree', '-r', '--full-tree', treeish]
raw = execute_git_command(command, repo_dir=repo_dir).splitlines()
output = [l.strip() for l in raw if l.strip()]
breakout = [k.split(None, 3) for k in output]
headers = ['mode', 'type', 'object', '... | module function_definition identifier parameters identifier default_parameter identifier string string_start string_content string_end block expression_statement assignment identifier list string string_start string_content string_end string string_start string_content string_end string string_start string_content stri... | Run git ls-tree. |
def do_EOF(self, args):
if _debug: ConsoleCmd._debug("do_EOF %r", args)
return self.do_exit(args) | module function_definition identifier parameters identifier identifier block if_statement identifier block expression_statement call attribute identifier identifier argument_list string string_start string_content string_end identifier return_statement call attribute identifier identifier argument_list identifier | Exit on system end of file character |
def unzip_unicode(output, version):
unzipper = zipfile.ZipFile(os.path.join(output, 'unicodedata', '%s.zip' % version))
target = os.path.join(output, 'unicodedata', version)
print('Unzipping %s.zip...' % version)
os.makedirs(target)
for f in unzipper.namelist():
unzipper.extract(f, target) | module function_definition identifier parameters identifier identifier block expression_statement assignment identifier call attribute identifier identifier argument_list call attribute attribute identifier identifier identifier argument_list identifier string string_start string_content string_end binary_operator stri... | Unzip the Unicode files. |
def add_arguments(cls, parser, sys_arg_list=None):
parser.add_argument('--tcp_check_interval',
dest='tcp_check_interval',
required=False, default=2, type=float,
help="TCP health-test interval in seconds, "
... | module function_definition identifier parameters identifier identifier default_parameter identifier none block expression_statement call attribute identifier identifier argument_list string string_start string_content string_end keyword_argument identifier string string_start string_content string_end keyword_argument ... | Arguments for the TCP health monitor plugin. |
def _triplify_object(self, data, parent):
subject = self.get_subject(data)
if self.path:
yield (subject, TYPE_SCHEMA, self.path, TYPE_SCHEMA)
if parent is not None:
yield (parent, self.predicate, subject, TYPE_LINK)
if self.reverse is not None:
... | module function_definition identifier parameters identifier identifier identifier block expression_statement assignment identifier call attribute identifier identifier argument_list identifier if_statement attribute identifier identifier block expression_statement yield tuple identifier identifier attribute identifier ... | Create bi-directional statements for object relationships. |
def response_json(self, status, response, content_type='application/json', encoding='utf-8', headers=None, jsonp=None):
encoder = JSONEncoder(
check_circular=self.app.validate_output,
allow_nan=False,
sort_keys=True,
indent=2 if self.app.pretty_output else None,
... | module function_definition identifier parameters identifier identifier identifier default_parameter identifier string string_start string_content string_end default_parameter identifier string string_start string_content string_end default_parameter identifier none default_parameter identifier none block expression_sta... | Send a JSON response |
def render_formset_errors(formset, **kwargs):
renderer_cls = get_formset_renderer(**kwargs)
return renderer_cls(formset, **kwargs).render_errors() | module function_definition identifier parameters identifier dictionary_splat_pattern identifier block expression_statement assignment identifier call identifier argument_list dictionary_splat identifier return_statement call attribute call identifier argument_list identifier dictionary_splat identifier identifier argum... | Render formset errors to a Bootstrap layout |
def find_resources(client):
wildcard = Keys.DISPENSER.format('*')
pattern = re.compile(Keys.DISPENSER.format('(.*)'))
return [pattern.match(d).group(1)
for d in client.scan_iter(wildcard)] | module function_definition identifier parameters identifier block expression_statement assignment identifier call attribute attribute identifier identifier identifier argument_list string string_start string_content string_end expression_statement assignment identifier call attribute identifier identifier argument_list... | Detect dispensers and return corresponding resources. |
def find_build_dir(path, build="_build"):
path = os.path.abspath(os.path.expanduser(path))
contents = os.listdir(path)
filtered_contents = [directory for directory in contents
if os.path.isdir(os.path.join(path, directory))]
if build in filtered_contents:
return os.pa... | module function_definition identifier parameters identifier default_parameter identifier string string_start string_content string_end block expression_statement assignment identifier call attribute attribute identifier identifier identifier argument_list call attribute attribute identifier identifier identifier argume... | try to guess the build folder's location |
def create(self, weeks):
user_pageviews = self.create_profiles('Pageviews', weeks)
user_downloads = self.create_profiles('Downloads', weeks)
self._export_profiles('Profiles', user_pageviews, user_downloads)
user_pageviews = self.create_profiles('Pageviews_IP', weeks, True)
user_d... | module function_definition identifier parameters identifier identifier block expression_statement assignment identifier call attribute identifier identifier argument_list string string_start string_content string_end identifier expression_statement assignment identifier call attribute identifier identifier argument_lis... | Create the user and ip profiles for the given weeks. |
def pairwise_mean(values):
"Averages between a value and the next value in a sequence"
return numpy.array([numpy.mean(pair) for pair in pairwise(values)]) | module function_definition identifier parameters identifier block expression_statement string string_start string_content string_end return_statement call attribute identifier identifier argument_list list_comprehension call attribute identifier identifier argument_list identifier for_in_clause identifier call identifi... | Averages between a value and the next value in a sequence |
def current_settings(self):
settings = {}
if not self.status_data:
return settings
for (key, val) in self.status_data.get('curvals', {}).items():
try:
val = float(val)
except ValueError:
val = val
if val in ('on', 'o... | module function_definition identifier parameters identifier block expression_statement assignment identifier dictionary if_statement not_operator attribute identifier identifier block return_statement identifier for_statement tuple_pattern identifier identifier call attribute call attribute attribute identifier identif... | Return dict with all config include. |
def scale_to(x, ratio, targ):
return max(math.floor(x*ratio), targ) | module function_definition identifier parameters identifier identifier identifier block return_statement call identifier argument_list call attribute identifier identifier argument_list binary_operator identifier identifier identifier | Calculate dimension of an image during scaling with aspect ratio |
def verify_chunks(self, chunks):
err = []
for chunk in chunks:
err.extend(self.verify_data(chunk))
return err | module function_definition identifier parameters identifier identifier block expression_statement assignment identifier list for_statement identifier identifier block expression_statement call attribute identifier identifier argument_list call attribute identifier identifier argument_list identifier return_statement id... | Verify the chunks in a list of low data structures |
def add_unique_template_variables(self, options):
options.update(dict(
geojson_data=json.dumps(self.data, ensure_ascii=False),
colorProperty=self.color_property,
colorType=self.color_function_type,
colorStops=self.color_stops,
strokeWidth=self.stroke_w... | module function_definition identifier parameters identifier identifier block expression_statement call attribute identifier identifier argument_list call identifier argument_list keyword_argument identifier call attribute identifier identifier argument_list attribute identifier identifier keyword_argument identifier fa... | Update map template variables specific to circle visual |
def _adb_screencap(self, scale=1.0):
remote_file = tempfile.mktemp(dir='/data/local/tmp/', prefix='screencap-', suffix='.png')
local_file = tempfile.mktemp(prefix='atx-screencap-', suffix='.png')
self.shell('screencap', '-p', remote_file)
try:
self.pull(remote_file, local_fil... | module function_definition identifier parameters identifier default_parameter identifier float block expression_statement assignment identifier call attribute identifier identifier argument_list keyword_argument identifier string string_start string_content string_end keyword_argument identifier string string_start str... | capture screen with adb shell screencap |
def reset_kernel(self):
client = self.get_current_client()
if client is not None:
self.switch_to_plugin()
client.reset_namespace() | module function_definition identifier parameters identifier block expression_statement assignment identifier call attribute identifier identifier argument_list if_statement comparison_operator identifier none block expression_statement call attribute identifier identifier argument_list expression_statement call attribu... | Reset kernel of current client. |
def summary(self):
print("\nStatus summary")
print("=" * 79)
print("{0}found {1} dependencies in {2} packages.{3}\n".format(
self.grey, self.count_dep, self.count_pkg, self.endc)) | module function_definition identifier parameters identifier block expression_statement call identifier argument_list string string_start string_content escape_sequence string_end expression_statement call identifier argument_list binary_operator string string_start string_content string_end integer expression_statement... | Summary by packages and dependencies |
def link_docstring(modules, docstring:str, overwrite:bool=False)->str:
"Search `docstring` for backticks and attempt to link those functions to respective documentation."
mods = listify(modules)
for mod in mods: _modvars.update(mod.__dict__)
return re.sub(BT_REGEX, replace_link, docstring) | module function_definition identifier parameters identifier typed_parameter identifier type identifier typed_default_parameter identifier type identifier false type identifier block expression_statement string string_start string_content string_end expression_statement assignment identifier call identifier argument_lis... | Search `docstring` for backticks and attempt to link those functions to respective documentation. |
def pretty_print_table_instance(table):
assert isinstance(table, Table)
def pretty_print_row(styled, plain):
click.secho(
" | ".join(
v + " " * (table.column_widths[k] - len(plain[k]))
for k, v in enumerate(styled)
)
)
pretty_print_row(... | module function_definition identifier parameters identifier block assert_statement call identifier argument_list identifier identifier function_definition identifier parameters identifier identifier block expression_statement call attribute identifier identifier argument_list call attribute string string_start string_c... | Pretty print a table instance. |
def delete_set(self, x):
if x not in self._parents:
return
members = list(self.members(x))
for v in members:
del self._parents[v]
del self._weights[v]
del self._prev_next[v]
del self._min_values[v] | module function_definition identifier parameters identifier identifier block if_statement comparison_operator identifier attribute identifier identifier block return_statement expression_statement assignment identifier call identifier argument_list call attribute identifier identifier argument_list identifier for_state... | Removes the equivalence class containing `x`. |
def edge_list(self) -> List[Edge]:
return [edge for edge in sorted(self._edges.values(), key=attrgetter("key"))] | module function_definition identifier parameters identifier type generic_type identifier type_parameter type identifier block return_statement list_comprehension identifier for_in_clause identifier call identifier argument_list call attribute attribute identifier identifier identifier argument_list keyword_argument ide... | The ordered list of edges in the container. |
def _caching_enabled(self):
try:
config = self._runtime.get_configuration()
parameter_id = Id('parameter:useCachingForQualifierIds@json')
if config.get_value_by_parameter(parameter_id).get_boolean_value():
return True
else:
return F... | module function_definition identifier parameters identifier block try_statement block expression_statement assignment identifier call attribute attribute identifier identifier identifier argument_list expression_statement assignment identifier call identifier argument_list string string_start string_content string_end ... | Returns True if caching is enabled per configuration, false otherwise. |
def addFeaturesSearchOptions(parser):
addFeatureSetIdArgument(parser)
addFeaturesReferenceNameArgument(parser)
addStartArgument(parser)
addEndArgument(parser)
addParentFeatureIdArgument(parser)
addFeatureTypesArgument(parser) | module function_definition identifier parameters identifier block expression_statement call identifier argument_list identifier expression_statement call identifier argument_list identifier expression_statement call identifier argument_list identifier expression_statement call identifier argument_list identifier expres... | Adds common options to a features search command line parser. |
def _relative_frequency(self, word):
count = self.type_counts.get(word, 0)
return math.log(count/len(self.type_counts)) if count > 0 else 0 | module function_definition identifier parameters identifier identifier block expression_statement assignment identifier call attribute attribute identifier identifier identifier argument_list identifier integer return_statement conditional_expression call attribute identifier identifier argument_list binary_operator id... | Computes the log relative frequency for a word form |
def close(self):
uwsgi.disconnect()
if self._req_ctx is None:
self._select_greenlet.kill()
self._event.set() | module function_definition identifier parameters identifier block expression_statement call attribute identifier identifier argument_list if_statement comparison_operator attribute identifier identifier none block expression_statement call attribute attribute identifier identifier identifier argument_list expression_st... | Disconnects uWSGI from the client. |
def add(self, items):
options = self._create_options(items)
for k, v in options.items():
if k in self.labels and v not in self.items:
options.pop(k)
count = 0
while f'{k}_{count}' in self.labels:
count += 1
o... | module function_definition identifier parameters identifier identifier block expression_statement assignment identifier call attribute identifier identifier argument_list identifier for_statement pattern_list identifier identifier call attribute identifier identifier argument_list block if_statement boolean_operator co... | Add items to options |
def isotime(at=None, subsecond=False):
if not at:
at = utcnow()
st = at.strftime(_ISO8601_TIME_FORMAT
if not subsecond
else _ISO8601_TIME_FORMAT_SUBSECOND)
tz = at.tzinfo.tzname(None) if at.tzinfo else 'UTC'
st += ('Z' if tz == 'UTC' else tz)
return ... | module function_definition identifier parameters default_parameter identifier none default_parameter identifier false block if_statement not_operator identifier block expression_statement assignment identifier call identifier argument_list expression_statement assignment identifier call attribute identifier identifier ... | Stringify time in ISO 8601 format. |
def read(url, **kwargs):
response = open_url(url, **kwargs)
try:
return response.read()
finally:
response.close() | module function_definition identifier parameters identifier dictionary_splat_pattern identifier block expression_statement assignment identifier call identifier argument_list identifier dictionary_splat identifier try_statement block return_statement call attribute identifier identifier argument_list finally_clause blo... | Read the contents of a URL into memory, return |
def euclid(a, b):
a = abs(a)
b = abs(b)
if a < b:
a, b = b, a
while b != 0:
a, b = b, a % b
return a | module function_definition identifier parameters identifier identifier block expression_statement assignment identifier call identifier argument_list identifier expression_statement assignment identifier call identifier argument_list identifier if_statement comparison_operator identifier identifier block expression_sta... | returns the Greatest Common Divisor of a and b |
def _get_image_size(self, maxcharno, maxlineno):
return (self._get_char_x(maxcharno) + self.image_pad,
self._get_line_y(maxlineno + 0) + self.image_pad) | module function_definition identifier parameters identifier identifier identifier block return_statement tuple binary_operator call attribute identifier identifier argument_list identifier attribute identifier identifier binary_operator call attribute identifier identifier argument_list binary_operator identifier integ... | Get the required image size. |
def merged_gasmap(self, **kwargs):
kwargs_copy = self.base_dict.copy()
kwargs_copy.update(**kwargs)
self._replace_none(kwargs_copy)
localpath = NameFactory.merged_gasmap_format.format(**kwargs_copy)
if kwargs.get('fullpath', False):
return self.fullpath(localp... | module function_definition identifier parameters identifier dictionary_splat_pattern identifier block expression_statement assignment identifier call attribute attribute identifier identifier identifier argument_list expression_statement call attribute identifier identifier argument_list dictionary_splat identifier exp... | return the file name for Galprop merged gasmaps |
def get(self, key: Text, locale: Optional[Text]) -> List[Tuple[Text, ...]]:
locale = self.choose_locale(locale)
return self.dict[locale][key] | module function_definition identifier parameters identifier typed_parameter identifier type identifier typed_parameter identifier type generic_type identifier type_parameter type identifier type generic_type identifier type_parameter type generic_type identifier type_parameter type identifier type ellipsis block expres... | Get a single set of intents. |
def use_settings(**kwargs):
from omnic import singletons
singletons.settings.use_settings_dict(kwargs)
yield
singletons.settings.use_previous_settings() | module function_definition identifier parameters dictionary_splat_pattern identifier block import_from_statement dotted_name identifier dotted_name identifier expression_statement call attribute attribute identifier identifier identifier argument_list identifier expression_statement yield expression_statement call attr... | Context manager to temporarily override settings |
def _role_remove(name, user=None, host=None, port=None, maintenance_db=None,
password=None, runas=None):
if not user_exists(name, user, host, port, maintenance_db,
password=password, runas=runas):
log.info('User \'%s\' does not exist', name)
return False
s... | module function_definition identifier parameters identifier default_parameter identifier none default_parameter identifier none default_parameter identifier none default_parameter identifier none default_parameter identifier none default_parameter identifier none block if_statement not_operator call identifier argument... | Removes a role from the Postgres Server |
def _write(self, session, openFile, replaceParamFile):
hmetRecords = self.hmetRecords
for record in hmetRecords:
openFile.write('%s\t%s\t%s\t%s\t%.3f\t%s\t%s\t%s\t%s\t%.2f\t%.2f\n' % (
record.hmetDateTime.year,
record.hmetDateTime.month,
record... | module function_definition identifier parameters identifier identifier identifier identifier block expression_statement assignment identifier attribute identifier identifier for_statement identifier identifier block expression_statement call attribute identifier identifier argument_list binary_operator string string_st... | Write HMET WES to File Method |
def EnsureSConsVersion(self, major, minor, revision=0):
if SCons.__version__ == '__' + 'VERSION__':
SCons.Warnings.warn(SCons.Warnings.DevelopmentVersionWarning,
"EnsureSConsVersion is ignored for development version")
return
scons_ver = self._get_major_minor_revi... | module function_definition identifier parameters identifier identifier identifier default_parameter identifier integer block if_statement comparison_operator attribute identifier identifier binary_operator string string_start string_content string_end string string_start string_content string_end block expression_state... | Exit abnormally if the SCons version is not late enough. |
def s3_etag(url: str) -> Optional[str]:
s3_resource = boto3.resource("s3")
bucket_name, s3_path = split_s3_path(url)
s3_object = s3_resource.Object(bucket_name, s3_path)
return s3_object.e_tag | module function_definition identifier parameters typed_parameter identifier type identifier type generic_type identifier type_parameter type identifier block expression_statement assignment identifier call attribute identifier identifier argument_list string string_start string_content string_end expression_statement a... | Check ETag on S3 object. |
def _byteify(data):
if isinstance(data, six.text_type):
return data.encode("utf-8")
if isinstance(data, list):
return [_byteify(item) for item in data]
if isinstance(data, dict):
return {
_byteify(key): _byteify(value) for key, value in data.items()
}
return d... | module function_definition identifier parameters identifier block if_statement call identifier argument_list identifier attribute identifier identifier block return_statement call attribute identifier identifier argument_list string string_start string_content string_end if_statement call identifier argument_list ident... | Convert unicode to bytes |
def remove_workspace(self):
def confirm_clicked():
if len(self.document_model.workspaces) > 1:
command = Workspace.RemoveWorkspaceCommand(self)
command.perform()
self.document_controller.push_undo_command(command)
caption = _("Remove workspace ... | module function_definition identifier parameters identifier block function_definition identifier parameters block if_statement comparison_operator call identifier argument_list attribute attribute identifier identifier identifier integer block expression_statement assignment identifier call attribute identifier identif... | Pose a dialog to confirm removal then remove workspace. |
def add_view(self, *args, **kwargs):
try:
singleton = self.model.objects.get()
except (self.model.DoesNotExist, self.model.MultipleObjectsReturned):
kwargs.setdefault("extra_context", {})
kwargs["extra_context"]["singleton"] = True
response = super(Singlet... | module function_definition identifier parameters identifier list_splat_pattern identifier dictionary_splat_pattern identifier block try_statement block expression_statement assignment identifier call attribute attribute attribute identifier identifier identifier identifier argument_list except_clause tuple attribute at... | Redirect to the change view if the singleton instance exists. |
def _filter_by_pattern(self, pattern):
try:
_len = len(pattern)
except TypeError:
raise TypeError("pattern is not a list of Booleans. Got {}".format(
type(pattern)))
_filt_values = [d for i, d in enumerate(self._values) if pattern[i % _len]]
_filt_... | module function_definition identifier parameters identifier identifier block try_statement block expression_statement assignment identifier call identifier argument_list identifier except_clause identifier block raise_statement call identifier argument_list call attribute string string_start string_content string_end i... | Filter the Filter the Data Collection based on a list of booleans. |
def _utc_float(self):
tai = self.tai
leap_dates = self.ts.leap_dates
leap_offsets = self.ts.leap_offsets
leap_reverse_dates = leap_dates + leap_offsets / DAY_S
i = searchsorted(leap_reverse_dates, tai, 'right')
return tai - leap_offsets[i] / DAY_S | module function_definition identifier parameters identifier block expression_statement assignment identifier attribute identifier identifier expression_statement assignment identifier attribute attribute identifier identifier identifier expression_statement assignment identifier attribute attribute identifier identifie... | Return UTC as a floating point Julian date. |
def url(self):
url = u'{home_url}{permalink}'.format(home_url=settings.HOME_URL,
permalink=self._permalink)
url = re.sub(r'/{2,}', r'/', url)
return url | module function_definition identifier parameters identifier block expression_statement assignment identifier call attribute string string_start string_content string_end identifier argument_list keyword_argument identifier attribute identifier identifier keyword_argument identifier attribute identifier identifier expre... | The site-relative URL to the post. |
def _parse_template(self, has_content):
reset = self._head
context = contexts.TEMPLATE_NAME
if has_content:
context |= contexts.HAS_TEMPLATE
try:
template = self._parse(context)
except BadRoute:
self._head = reset
raise
self... | module function_definition identifier parameters identifier identifier block expression_statement assignment identifier attribute identifier identifier expression_statement assignment identifier attribute identifier identifier if_statement identifier block expression_statement augmented_assignment identifier attribute ... | Parse a template at the head of the wikicode string. |
def remove_api_key(self, api_id, stage_name):
response = self.apigateway_client.get_api_keys(
limit=1,
nameQuery='{}_{}'.format(stage_name, api_id)
)
for api_key in response.get('items'):
self.apigateway_client.delete_api_key(
apiKey="{}".forma... | module function_definition identifier parameters identifier identifier identifier block expression_statement assignment identifier call attribute attribute identifier identifier identifier argument_list keyword_argument identifier integer keyword_argument identifier call attribute string string_start string_content str... | Remove a generated API key for api_id and stage_name |
def bar(self, progress):
if not hasattr(self, "_limit") or not self._limit:
self._limit = self.terminal_size()
graph_progress = int(progress * self._limit)
self.stdout.write('\r', ending='')
progress_format = "[%-{}s] %d%%".format(self._limit)
self.stdout.write(
... | module function_definition identifier parameters identifier identifier block if_statement boolean_operator not_operator call identifier argument_list identifier string string_start string_content string_end not_operator attribute identifier identifier block expression_statement assignment attribute identifier identifie... | Shows on the stdout the progress bar for the given progress. |
def clean_new(self, value):
value = self.schema_class(value).full_clean()
return self.object_class(**value) | module function_definition identifier parameters identifier identifier block expression_statement assignment identifier call attribute call attribute identifier identifier argument_list identifier identifier argument_list return_statement call attribute identifier identifier argument_list dictionary_splat identifier | Return a new object instantiated with cleaned data. |
def makeHawkExt(self):
o = self.options
c = o.get('credentials', {})
if c.get('clientId') and c.get('accessToken'):
ext = {}
cert = c.get('certificate')
if cert:
if six.PY3 and isinstance(cert, six.binary_type):
cert = cert.... | module function_definition identifier parameters identifier block expression_statement assignment identifier attribute identifier identifier expression_statement assignment identifier call attribute identifier identifier argument_list string string_start string_content string_end dictionary if_statement boolean_operato... | Make an 'ext' for Hawk authentication |
def server_info(self):
response = self._post(self.apiurl + "/v2/server/info", data={'apikey': self.apikey})
return self._raise_or_extract(response) | module function_definition identifier parameters identifier block expression_statement assignment identifier call attribute identifier identifier argument_list binary_operator attribute identifier identifier string string_start string_content string_end keyword_argument identifier dictionary pair string string_start st... | Query information about the server. |
def print_subcommands(self):
lines = ["Call"]
lines.append('-'*len(lines[-1]))
lines.append('')
lines.append("> jhubctl <subcommand> <resource-type> <resource-name>")
lines.append('')
lines.append("Subcommands")
lines.append('-'*len(lines[-1]))
lines.appen... | module function_definition identifier parameters identifier block expression_statement assignment identifier list string string_start string_content string_end expression_statement call attribute identifier identifier argument_list binary_operator string string_start string_content string_end call identifier argument_l... | Print the subcommand part of the help. |
def load_context(context, file_path=None):
if not file_path:
file_path = _get_context_filepath()
if os.path.exists(file_path):
with io.open(file_path, encoding='utf-8') as f:
for line in f:
execute(line, context) | module function_definition identifier parameters identifier default_parameter identifier none block if_statement not_operator identifier block expression_statement assignment identifier call identifier argument_list if_statement call attribute attribute identifier identifier identifier argument_list identifier block wi... | Load a Context object in place from user data directory. |
def limit(self, keys):
if not isinstance(keys, list) and not isinstance(keys, tuple):
keys = [keys]
remove_keys = [k for k in self.keys() if k not in keys]
for k in remove_keys:
self.pop(k) | module function_definition identifier parameters identifier identifier block if_statement boolean_operator not_operator call identifier argument_list identifier identifier not_operator call identifier argument_list identifier identifier block expression_statement assignment identifier list identifier expression_stateme... | Remove all keys other than the keys specified. |
def profile_path(profile_id, profile):
user = os.path.expanduser("~")
return os.path.join(user, profile_id + profile) | module function_definition identifier parameters identifier identifier block expression_statement assignment identifier call attribute attribute identifier identifier identifier argument_list string string_start string_content string_end return_statement call attribute attribute identifier identifier identifier argumen... | Create full path to given provide for the current user. |
def passagg(recipient, sender):
adj = random.choice(pmxbot.phrases.adjs)
if random.choice([False, True]):
lead = ""
trail = recipient if not recipient else ", %s" % recipient
else:
lead = recipient if not recipient else "%s, " % recipient
trail = ""
body = random.choice(pmxbot.phrases.adj_intros) % adj
if ... | module function_definition identifier parameters identifier identifier block expression_statement assignment identifier call attribute identifier identifier argument_list attribute attribute identifier identifier identifier if_statement call attribute identifier identifier argument_list list false true block expression... | Generate a passive-aggressive statement to recipient from sender. |
def register_bse_task(self, *args, **kwargs):
kwargs["task_class"] = BseTask
return self.register_task(*args, **kwargs) | module function_definition identifier parameters identifier list_splat_pattern identifier dictionary_splat_pattern identifier block expression_statement assignment subscript identifier string string_start string_content string_end identifier return_statement call attribute identifier identifier argument_list list_splat... | Register a Bethe-Salpeter task. |
def add(self, histogram: Histogram1D):
if self.binning and not self.binning == histogram.binning:
raise ValueError("Cannot add histogram with different binning.")
self.histograms.append(histogram) | module function_definition identifier parameters identifier typed_parameter identifier type identifier block if_statement boolean_operator attribute identifier identifier not_operator comparison_operator attribute identifier identifier attribute identifier identifier block raise_statement call identifier argument_list ... | Add a histogram to the collection. |
def show_run(command_history_id):
from pprint import pprint
from .config import ConfigStore
from .database import DataBase
db = DataBase(ConfigStore().db_path)
with db.connection():
for ch_id in command_history_id:
crec = db.get_full_command_record(ch_id)
pprint(crec.... | module function_definition identifier parameters identifier block import_from_statement dotted_name identifier dotted_name identifier import_from_statement relative_import import_prefix dotted_name identifier dotted_name identifier import_from_statement relative_import import_prefix dotted_name identifier dotted_name i... | Show detailed command history by its ID. |
def _set_complete_option(cls):
get_config = cls.context.get_config
complete = get_config('complete', None)
if complete is None:
conditions = [
get_config('transitions', False),
get_config('named_transitions', False),
]
complete ... | module function_definition identifier parameters identifier block expression_statement assignment identifier attribute attribute identifier identifier identifier expression_statement assignment identifier call identifier argument_list string string_start string_content string_end none if_statement comparison_operator i... | Check and set complete option. |
def detail(callback=None, path=None, method=Method.GET, resource=None, tags=None, summary="Get specified resource.",
middleware=None):
def inner(c):
op = Operation(c, path or PathParam('{key_field}'), method, resource, tags, summary, middleware)
op.responses.add(Response(HTTPStatus.OK, "G... | module function_definition identifier parameters default_parameter identifier none default_parameter identifier none default_parameter identifier attribute identifier identifier default_parameter identifier none default_parameter identifier none default_parameter identifier string string_start string_content string_end... | Decorator to configure an operation that fetches a resource. |
def short_form_one_format(jupytext_format):
if not isinstance(jupytext_format, dict):
return jupytext_format
fmt = jupytext_format['extension']
if 'suffix' in jupytext_format:
fmt = jupytext_format['suffix'] + fmt
elif fmt.startswith('.'):
fmt = fmt[1:]
if 'prefix' in jupytex... | module function_definition identifier parameters identifier block if_statement not_operator call identifier argument_list identifier identifier block return_statement identifier expression_statement assignment identifier subscript identifier string string_start string_content string_end if_statement comparison_operator... | Represent one jupytext format as a string |
def _parse_file(self):
args = utilities.build_includes(self.arch.includes())
args.append('-E')
args.append('-D__attribute__(x)=')
args.append('-D__extension__=')
self.ast = parse_file(self.filepath, use_cpp=True, cpp_path='arm-none-eabi-gcc', cpp_args=args) | module function_definition identifier parameters identifier block expression_statement assignment identifier call attribute identifier identifier argument_list call attribute attribute identifier identifier identifier argument_list expression_statement call attribute identifier identifier argument_list string string_st... | Preprocess and parse C file into an AST |
def _create_threads(self):
creator = JobCreator(
self.config,
self.observers.jobs,
self.logger
)
self.jobs = creator.job_factory() | module function_definition identifier parameters identifier block expression_statement assignment identifier call identifier argument_list attribute identifier identifier attribute attribute identifier identifier identifier attribute identifier identifier expression_statement assignment attribute identifier identifier ... | This method creates job instances. |
def setCell(self, x, y, v):
self.cells[y][x] = v | module function_definition identifier parameters identifier identifier identifier identifier block expression_statement assignment subscript subscript attribute identifier identifier identifier identifier identifier | set the cell value at x,y |
def load_boston():
dataset = datasets.load_boston()
return Dataset(load_boston.__doc__, dataset.data, dataset.target, r2_score) | module function_definition identifier parameters block expression_statement assignment identifier call attribute identifier identifier argument_list return_statement call identifier argument_list attribute identifier identifier attribute identifier identifier attribute identifier identifier identifier | Boston House Prices Dataset. |
def close(self):
if self._closing:
return
log.info('MWorkerQueue under PID %s is closing', os.getpid())
self._closing = True
if getattr(self, '_monitor', None) is not None:
self._monitor.stop()
self._monitor = None
if getattr(self, '_w_monitor'... | module function_definition identifier parameters identifier block if_statement attribute identifier identifier block return_statement expression_statement call attribute identifier identifier argument_list string string_start string_content string_end call attribute identifier identifier argument_list expression_statem... | Cleanly shutdown the router socket |
def cache_call_signatures(source, user_pos, stmt):
index = user_pos[0] - 1
lines = source.splitlines() or ['']
if source and source[-1] == '\n':
lines.append('')
before_cursor = lines[index][:user_pos[1]]
other_lines = lines[stmt.start_pos[0]:index]
whole = '\n'.join(other_lines + [befor... | module function_definition identifier parameters identifier identifier identifier block expression_statement assignment identifier binary_operator subscript identifier integer integer expression_statement assignment identifier boolean_operator call attribute identifier identifier argument_list list string string_start ... | This function calculates the cache key. |
def run_and_save(data):
run(None, data)
stats_file, idxstats_file = _get_stats_files(data)
data = tz.update_in(data, ["depth", "samtools", "stats"], lambda x: stats_file)
data = tz.update_in(data, ["depth", "samtools", "idxstats"], lambda x: idxstats_file)
return data | module function_definition identifier parameters identifier block expression_statement call identifier argument_list none identifier expression_statement assignment pattern_list identifier identifier call identifier argument_list identifier expression_statement assignment identifier call attribute identifier identifier... | Run QC, saving file outputs in data dictionary. |
def close_stream(self):
if not self.is_connected:
return
self.stream.close()
self.state = DISCONNECTED
self.on_close.send(self) | module function_definition identifier parameters identifier block if_statement not_operator attribute identifier identifier block return_statement expression_statement call attribute attribute identifier identifier identifier argument_list expression_statement assignment attribute identifier identifier identifier expre... | Close the underlying socket. |
def symbol(self):
if self._symbol is None:
self._symbol = self._symbol_extract(cache.RE_CURSOR)
return self._symbol | module function_definition identifier parameters identifier block if_statement comparison_operator attribute identifier identifier none block expression_statement assignment attribute identifier identifier call attribute identifier identifier argument_list attribute identifier identifier return_statement attribute iden... | Gets the symbol under the current cursor. |
def _hue(color, **kwargs):
h = colorsys.rgb_to_hls(*[x / 255.0 for x in color.value[:3]])[0]
return NumberValue(h * 360.0) | module function_definition identifier parameters identifier dictionary_splat_pattern identifier block expression_statement assignment identifier subscript call attribute identifier identifier argument_list list_splat list_comprehension binary_operator identifier float for_in_clause identifier subscript attribute identi... | Get hue value of HSL color. |
def to_dict(self):
return {
'id': self.set_id,
'title': self.title,
'terms': [term.to_dict() for term in self.terms]
} | module function_definition identifier parameters identifier block return_statement dictionary pair string string_start string_content string_end attribute identifier identifier pair string string_start string_content string_end attribute identifier identifier pair string string_start string_content string_end list_comp... | Convert WordSet into raw dictionary data. |
def _remove_boundaries(self, interval):
begin = interval.begin
end = interval.end
if self.boundary_table[begin] == 1:
del self.boundary_table[begin]
else:
self.boundary_table[begin] -= 1
if self.boundary_table[end] == 1:
del self.boundary_table... | module function_definition identifier parameters identifier identifier block expression_statement assignment identifier attribute identifier identifier expression_statement assignment identifier attribute identifier identifier if_statement comparison_operator subscript attribute identifier identifier identifier integer... | Removes the boundaries of the interval from the boundary table. |
def dump_image_data(dataset_dir, data_dir, dataset, color_array_info, root=None, compress=True):
if root is None:
root = {}
root['vtkClass'] = 'vtkImageData'
container = root
container['spacing'] = dataset.GetSpacing()
container['origin'] = dataset.GetOrigin()
container['extent'] = datas... | module function_definition identifier parameters identifier identifier identifier identifier default_parameter identifier none default_parameter identifier true block if_statement comparison_operator identifier none block expression_statement assignment identifier dictionary expression_statement assignment subscript id... | Dump image data object to vtkjs |
def run(self):
self.find_new()
for n in self.news:
print("{0}".format(n))
print("")
self.msg.template(78)
print("| Installed {0} new configuration files:".format(
len(self.news)))
self.msg.template(78)
self.choices() | module function_definition identifier parameters identifier block expression_statement call attribute identifier identifier argument_list for_statement identifier attribute identifier identifier block expression_statement call identifier argument_list call attribute string string_start string_content string_end identif... | print .new configuration files |
def jsontype(self, name, path=Path.rootPath()):
return self.execute_command('JSON.TYPE', name, str_path(path)) | module function_definition identifier parameters identifier identifier default_parameter identifier call attribute identifier identifier argument_list block return_statement call attribute identifier identifier argument_list string string_start string_content string_end identifier call identifier argument_list identifi... | Gets the type of the JSON value under ``path`` from key ``name`` |
def to_node(value):
if isinstance(value, Node):
return value
elif isinstance(value, str):
return Node('string', value=value, pseudo_type='String')
elif isinstance(value, int):
return Node('int', value=value, pseudo_type='Int')
elif isinstance(value, bool):
return Node('bo... | module function_definition identifier parameters identifier block if_statement call identifier argument_list identifier identifier block return_statement identifier elif_clause call identifier argument_list identifier identifier block return_statement call identifier argument_list string string_start string_content str... | Expand to a literal node if a basic type otherwise just returns the node |
def _check_cat_dict_source(self, cat_dict_class, key_in_self, **kwargs):
source = kwargs.get(cat_dict_class._KEYS.SOURCE, None)
if source is None:
raise CatDictError(
"{}: `source` must be provided!".format(self[self._KEYS.NAME]),
warn=True)
for x in s... | module function_definition identifier parameters identifier identifier identifier dictionary_splat_pattern identifier block expression_statement assignment identifier call attribute identifier identifier argument_list attribute attribute identifier identifier identifier none if_statement comparison_operator identifier ... | Check that a source exists and that a quantity isn't erroneous. |
def _update_phi(self):
etaprod = 1.0
for w in range(N_NT - 1):
self.phi[w] = etaprod * (1 - self.eta[w])
etaprod *= self.eta[w]
self.phi[N_NT - 1] = etaprod | module function_definition identifier parameters identifier block expression_statement assignment identifier float for_statement identifier call identifier argument_list binary_operator identifier integer block expression_statement assignment subscript attribute identifier identifier identifier binary_operator identifi... | Update `phi` using current `eta`. |
def runserver(debug, console_log, use_reloader, address, port, timeout, workers, socket):
debug = debug or config.get('DEBUG') or console_log
if debug:
print(Fore.BLUE + '-=' * 20)
print(
Fore.YELLOW + 'Starting Superset server in ' +
Fore.RED + 'DEBUG' +
Fore... | module function_definition identifier parameters identifier identifier identifier identifier identifier identifier identifier identifier block expression_statement assignment identifier boolean_operator boolean_operator identifier call attribute identifier identifier argument_list string string_start string_content str... | Starts a Superset web server. |
def pyspread(S=None):
app = MainApplication(S=S, redirect=False)
app.MainLoop() | module function_definition identifier parameters default_parameter identifier none block expression_statement assignment identifier call identifier argument_list keyword_argument identifier identifier keyword_argument identifier false expression_statement call attribute identifier identifier argument_list | Holds application main loop |
def graded_submissions(self):
qs = self._valid_submissions().filter(state__in=[Submission.GRADED])
return qs | module function_definition identifier parameters identifier block expression_statement assignment identifier call attribute call attribute identifier identifier argument_list identifier argument_list keyword_argument identifier list attribute identifier identifier return_statement identifier | Queryset for the graded submissions, which are worth closing. |
def handle_starttag(self, tag, attrs):
if not tag == 'a':
return
for attr in attrs:
if attr[0] == 'href':
url = urllib.unquote(attr[1])
self.active_url = url.rstrip('/').split('/')[-1]
return | module function_definition identifier parameters identifier identifier identifier block if_statement not_operator comparison_operator identifier string string_start string_content string_end block return_statement for_statement identifier identifier block if_statement comparison_operator subscript identifier integer st... | Callback for when a tag gets opened. |
def on_resize(self, event):
self.context.set_viewport(0, 0, event.size[0], event.size[1])
for visual in self.visuals:
visual.on_resize(event.size)
self.update() | module function_definition identifier parameters identifier identifier block expression_statement call attribute attribute identifier identifier identifier argument_list integer integer subscript attribute identifier identifier integer subscript attribute identifier identifier integer for_statement identifier attribute... | Resize the OpenGL context. |
async def echo_all(app, message):
for address in app.kv.get_prefix('address.').values():
host, port = address.decode().split(':')
port = int(port)
await tcp_echo_client(message, loop, host, port) | module function_definition identifier parameters identifier identifier block for_statement identifier call attribute call attribute attribute identifier identifier identifier argument_list string string_start string_content string_end identifier argument_list block expression_statement assignment pattern_list identifie... | Send and recieve a message from all running echo servers |
async def fromURL(
cls, url, *, credentials=None, insecure=False):
try:
description = await helpers.fetch_api_description(
url, insecure=insecure)
except helpers.RemoteError as error:
raise SessionError(str(error))
else:
session = c... | module function_definition identifier parameters identifier identifier keyword_separator default_parameter identifier none default_parameter identifier false block try_statement block expression_statement assignment identifier await call attribute identifier identifier argument_list identifier keyword_argument identifi... | Return a `SessionAPI` for a given MAAS instance. |
def type(self):
if self.__type is None:
found_type = find_definition(
self.__type_name, self.message_definition())
if not (found_type is not Enum and
isinstance(found_type, type) and
issubclass(found_type, Enum)):
ra... | module function_definition identifier parameters identifier block if_statement comparison_operator attribute identifier identifier none block expression_statement assignment identifier call identifier argument_list attribute identifier identifier call attribute identifier identifier argument_list if_statement not_opera... | Enum type used for field. |
def load(path):
with open(path) as rfile:
steps = MODEL.parse(rfile.read())
new_steps = []
for step in steps:
new_steps += expand_includes(step, path)
return new_steps | module function_definition identifier parameters identifier block with_statement with_clause with_item as_pattern call identifier argument_list identifier as_pattern_target identifier block expression_statement assignment identifier call attribute identifier identifier argument_list call attribute identifier identifier... | Load |path| and recursively expand any includes. |
def _normalize(self, name, columns, points):
for i, _ in enumerate(points):
if points[i] is None:
del(points[i])
del(columns[i])
continue
try:
points[i] = float(points[i])
except (TypeError, ValueError):
... | module function_definition identifier parameters identifier identifier identifier identifier block for_statement pattern_list identifier identifier call identifier argument_list identifier block if_statement comparison_operator subscript identifier identifier none block delete_statement parenthesized_expression subscri... | Normalize data for the InfluxDB's data model. |
def _flush(self):
if self._recording:
raise Exception("Cannot flush data queue while recording!")
if self._saving_cache:
logging.warn("Flush when using cache means unsaved data will be lost and not returned!")
self._cmds_q.put(("reset_data_segment",))
else:
... | module function_definition identifier parameters identifier block if_statement attribute identifier identifier block raise_statement call identifier argument_list string string_start string_content string_end if_statement attribute identifier identifier block expression_statement call attribute identifier identifier ar... | Returns a list of all current data |
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