code
stringlengths
51
2.34k
sequence
stringlengths
186
3.94k
docstring
stringlengths
11
171
def mcmc_emcee(self, n_walkers, n_run, n_burn, mean_start, sigma_start): sampler = emcee.EnsembleSampler(n_walkers, self.cosmoParam.numParam, self.chain.likelihood) p0 = emcee.utils.sample_ball(mean_start, sigma_start, n_walkers) new_pos, _, _, _ = sampler.run_mcmc(p0, n_burn) sampler.re...
module function_definition identifier parameters identifier identifier identifier identifier identifier identifier block expression_statement assignment identifier call attribute identifier identifier argument_list identifier attribute attribute identifier identifier identifier attribute attribute identifier identifier...
returns the mcmc analysis of the parameter space
def energy(self): result = 0.0 for index1 in range(self.numc): for index2 in range(index1): if self.scaling[index1, index2] > 0: for se, ve in self.yield_pair_energies(index1, index2): result += se*ve*self.scaling[index1, index2] ...
module function_definition identifier parameters identifier block expression_statement assignment identifier float for_statement identifier call identifier argument_list attribute identifier identifier block for_statement identifier call identifier argument_list identifier block if_statement comparison_operator subscri...
Compute the energy of the system
def create_or_update(ctx, model, xmlid, values): if isinstance(model, basestring): model = ctx.env[model] record = ctx.env.ref(xmlid, raise_if_not_found=False) if record: record.update(values) else: record = model.create(values) add_xmlid(ctx, record, xmlid) return re...
module function_definition identifier parameters identifier identifier identifier identifier block if_statement call identifier argument_list identifier identifier block expression_statement assignment identifier subscript attribute identifier identifier identifier expression_statement assignment identifier call attrib...
Create or update a record matching xmlid with values
def _send_pub(self, load): for transport, opts in iter_transport_opts(self.opts): chan = salt.transport.server.PubServerChannel.factory(opts) chan.publish(load)
module function_definition identifier parameters identifier identifier block for_statement pattern_list identifier identifier call identifier argument_list attribute identifier identifier block expression_statement assignment identifier call attribute attribute attribute attribute identifier identifier identifier ident...
Take a load and send it across the network to connected minions
def errcat(self): post_recs = MPost.query_random(limit=1000) outrecs = [] errrecs = [] idx = 0 for postinfo in post_recs: if idx > 16: break cat = MPost2Catalog.get_first_category(postinfo.uid) if cat: if 'def_ca...
module function_definition identifier parameters identifier block expression_statement assignment identifier call attribute identifier identifier argument_list keyword_argument identifier integer expression_statement assignment identifier list expression_statement assignment identifier list expression_statement assignm...
List the posts to be modified.
def _make_text_predict_fn(self, labels, instance, column_to_explain): def _predict_fn(perturbed_text): predict_input = [] for x in perturbed_text: instance_copy = dict(instance) instance_copy[column_to_explain] = x predict_input.append(inst...
module function_definition identifier parameters identifier identifier identifier identifier block function_definition identifier parameters identifier block expression_statement assignment identifier list for_statement identifier identifier block expression_statement assignment identifier call identifier argument_list...
Create a predict_fn that can be used by LIME text explainer.
def _startHungConnectionTimer(self): def hungConnection(): self._hung_callback() self._hungConnectionTimer = None self.transport.loseConnection() self._hungConnectionTimer = self._reactor.callLater( self._HUNG_CONNECTION_TIMEOUT, hungConnection)
module function_definition identifier parameters identifier block function_definition identifier parameters block expression_statement call attribute identifier identifier argument_list expression_statement assignment attribute identifier identifier none expression_statement call attribute attribute identifier identifi...
Start a timer to detect if the connection is hung.
def escape_latex_str_if_str(value): if not isinstance(value, str): return value for regex, replace_text in REGEX_ESCAPE_CHARS: value = re.sub(regex, replace_text, value) value = re.sub(REGEX_BACKSLASH, r'\\\\', value) return value
module function_definition identifier parameters identifier block if_statement not_operator call identifier argument_list identifier identifier block return_statement identifier for_statement pattern_list identifier identifier identifier block expression_statement assignment identifier call attribute identifier identif...
Escape a latex string
def Seek(self, offset, whence=os.SEEK_SET): if whence == os.SEEK_SET: self._offset = offset elif whence == os.SEEK_CUR: self._offset += offset elif whence == os.SEEK_END: self._offset = self._length + offset else: raise ValueError("Invalid whence argument: %s" % whence)
module function_definition identifier parameters identifier identifier default_parameter identifier attribute identifier identifier block if_statement comparison_operator identifier attribute identifier identifier block expression_statement assignment attribute identifier identifier identifier elif_clause comparison_op...
Moves the reading cursor.
def process_request(self, request): if COOKIE_KEY in request.COOKIES and \ request.COOKIES[COOKIE_KEY] == COOKIE_SPAM: response = HttpResponse("") response.status_code = 404 if DJANGOSPAM_LOG: logger.log("SPAM REQUEST", request.meth...
module function_definition identifier parameters identifier identifier block if_statement boolean_operator comparison_operator identifier attribute identifier identifier line_continuation comparison_operator subscript attribute identifier identifier identifier identifier block expression_statement assignment identifier...
Discovers if a request is from a knwon spam bot and denies access.
def append_scope(self): self.stack.current.append(Scope(self.stack.current.current))
module function_definition identifier parameters identifier block expression_statement call attribute attribute attribute identifier identifier identifier identifier argument_list call identifier argument_list attribute attribute attribute identifier identifier identifier identifier
Create a new scope in the current frame.
def catalog(self): if self._catalog is None: logger.debug("SuperModel::catalog: *Fetch catalog*") self._catalog = self.get_catalog_for(self.brain) return self._catalog
module function_definition identifier parameters identifier block if_statement comparison_operator attribute identifier identifier none block expression_statement call attribute identifier identifier argument_list string string_start string_content string_end expression_statement assignment attribute identifier identif...
Primary registered catalog for the wrapped portal type
def _has_plotted_object(self, ax): return (len(ax.lines) != 0 or len(ax.artists) != 0 or len(ax.containers) != 0)
module function_definition identifier parameters identifier identifier block return_statement parenthesized_expression boolean_operator boolean_operator comparison_operator call identifier argument_list attribute identifier identifier integer comparison_operator call identifier argument_list attribute identifier identi...
check whether ax has data
def _update_id_list(self): self.id_list = [id(self.editor.tabs.widget(_i)) for _i in range(self.editor.tabs.count())]
module function_definition identifier parameters identifier block expression_statement assignment attribute identifier identifier list_comprehension call identifier argument_list call attribute attribute attribute identifier identifier identifier identifier argument_list identifier for_in_clause identifier call identif...
Update list of corresponpding ids and tabs.
def _sample_orthonormal_to(mu): v = np.random.randn(mu.shape[0]) proj_mu_v = mu * np.dot(mu, v) / np.linalg.norm(mu) orthto = v - proj_mu_v return orthto / np.linalg.norm(orthto)
module function_definition identifier parameters identifier block expression_statement assignment identifier call attribute attribute identifier identifier identifier argument_list subscript attribute identifier identifier integer expression_statement assignment identifier binary_operator binary_operator identifier cal...
Sample point on sphere orthogonal to mu.
def anim_to_html(anim, fps=None, embed_frames=True, default_mode='loop'): if fps is None and hasattr(anim, '_interval'): fps = 1000. / anim._interval plt.close(anim._fig) if hasattr(anim, "_html_representation"): return anim._html_representation else: with _NameOnlyTemporaryFile(...
module function_definition identifier parameters identifier default_parameter identifier none default_parameter identifier true default_parameter identifier string string_start string_content string_end block if_statement boolean_operator comparison_operator identifier none call identifier argument_list identifier stri...
Generate HTML representation of the animation
def _get_version(): with open("../waliki/__init__.py") as fh: for line in fh: if line.startswith("__version__ = "): return line.split("=")[-1].strip().strip("'").strip('"')
module function_definition identifier parameters block with_statement with_clause with_item as_pattern call identifier argument_list string string_start string_content string_end as_pattern_target identifier block for_statement identifier identifier block if_statement call attribute identifier identifier argument_list ...
Get the version from package itself.
def id(self, value): i = value.rfind('/') if (i > 0): self.server_and_prefix = value[:i] self.identifier = value[(i + 1):] elif (i == 0): self.server_and_prefix = '' self.identifier = value[(i + 1):] else: self.server_and_prefix...
module function_definition identifier parameters identifier identifier block expression_statement assignment identifier call attribute identifier identifier argument_list string string_start string_content string_end if_statement parenthesized_expression comparison_operator identifier integer block expression_statement...
Split into server_and_prefix and identifier.
def ConvDiagonalGRU(units, kernel_size=(3, 3)): def BuildConv(): return layers.Conv(filters=units, kernel_size=kernel_size, padding='SAME') return layers.GeneralGRUCell( candidate_transform=BuildConv, memory_transform=DiagonalGate, gate_nonlinearity=layers.HardSigmoid, candidate_nonlinea...
module function_definition identifier parameters identifier default_parameter identifier tuple integer integer block function_definition identifier parameters block return_statement call attribute identifier identifier argument_list keyword_argument identifier identifier keyword_argument identifier identifier keyword_a...
Build convolutional GRU with diagonal gating as in ImprovedNGPU.
def _nonempty_project(string): value = str(string) if len(value) == 0: msg = "No project provided and no default project configured" raise argparse.ArgumentTypeError(msg) return value
module function_definition identifier parameters identifier block expression_statement assignment identifier call identifier argument_list identifier if_statement comparison_operator call identifier argument_list identifier integer block expression_statement assignment identifier string string_start string_content stri...
Argparse validator for ensuring a workspace is provided
def release(button=LEFT): location = get_position() button_code, _, button_up, _ = _button_mapping[button] e = Quartz.CGEventCreateMouseEvent( None, button_up, location, button_code) if _last_click["time"] is not None and _last_click["time"] > datetime.datetime.now() - da...
module function_definition identifier parameters default_parameter identifier identifier block expression_statement assignment identifier call identifier argument_list expression_statement assignment pattern_list identifier identifier identifier identifier subscript identifier identifier expression_statement assignment...
Sends an up event for the specified button, using the provided constants
def boost(dev, target): click.echo("Boost: %s" % dev.boost) if target is not None: click.echo("Setting boost: %s" % target) dev.boost = target
module function_definition identifier parameters identifier identifier block expression_statement call attribute identifier identifier argument_list binary_operator string string_start string_content string_end attribute identifier identifier if_statement comparison_operator identifier none block expression_statement c...
Gets or sets the boost mode.
def can_document_member(cls, member, membername, isattr, parent): if not super().can_document_member(member, membername, isattr, parent): return False return iscoroutinefunction(member)
module function_definition identifier parameters identifier identifier identifier identifier identifier block if_statement not_operator call attribute call identifier argument_list identifier argument_list identifier identifier identifier identifier block return_statement false return_statement call identifier argument...
Called to see if a member can be documented by this documenter.
def stop_tracking(self, end_time): facts = self.__get_todays_facts() if facts and not facts[-1]['end_time']: self.__touch_fact(facts[-1], end_time) self.facts_changed()
module function_definition identifier parameters identifier identifier block expression_statement assignment identifier call attribute identifier identifier argument_list if_statement boolean_operator identifier not_operator subscript subscript identifier unary_operator integer string string_start string_content string...
Stops tracking the current activity
def xpath(node, query, namespaces={}): if namespaces and 'None' not in namespaces: return node.xpath(query, namespaces=namespaces) return node.xpath(query)
module function_definition identifier parameters identifier identifier default_parameter identifier dictionary block if_statement boolean_operator identifier comparison_operator string string_start string_content string_end identifier block return_statement call attribute identifier identifier argument_list identifier ...
A safe xpath that only uses namespaces if available.
def wr_tsv(self, fout_tsv): with open(fout_tsv, 'w') as prt: kws_tsv = { 'fld2fmt': {f:'{:8.2e}' for f in self.flds_cur if f[:2] == 'p_'}, 'prt_flds':self.flds_cur} prt_tsv_sections(prt, self.desc2nts['sections'], **kws_tsv) print(" WROTE: {TS...
module function_definition identifier parameters identifier identifier block with_statement with_clause with_item as_pattern call identifier argument_list identifier string string_start string_content string_end as_pattern_target identifier block expression_statement assignment identifier dictionary pair string string_...
Print grouped GOEA results into a tab-separated file.
def _insert_command(self, command): self._clear_user_buffer() tc = self.edit.textCursor() tc.insertText(command) self.edit.setTextCursor(tc)
module function_definition identifier parameters identifier identifier block expression_statement call attribute identifier identifier argument_list expression_statement assignment identifier call attribute attribute identifier identifier identifier argument_list expression_statement call attribute identifier identifie...
Insert command by replacing the current input buffer and display it on the text edit.
def purge_old(self): if self.keep_max is not None: keys = self.redis_conn.keys(self.get_key() + ':*') keys.sort(reverse=True) while len(keys) > self.keep_max: key = keys.pop() self.redis_conn.delete(key)
module function_definition identifier parameters identifier block if_statement comparison_operator attribute identifier identifier none block expression_statement assignment identifier call attribute attribute identifier identifier identifier argument_list binary_operator call attribute identifier identifier argument_l...
Removes keys that are beyond our keep_max limit
def ExpireRegEx(self, regex): reg = re.compile(regex) for key in list(self._hash): if reg.match(key): self.ExpireObject(key)
module function_definition identifier parameters identifier identifier block expression_statement assignment identifier call attribute identifier identifier argument_list identifier for_statement identifier call identifier argument_list attribute identifier identifier block if_statement call attribute identifier identi...
Expire all the objects with the key matching the regex.
def rollout(self, batch_info: BatchInfo, model: Model, number_of_steps: int) -> Rollout: raise NotImplementedError
module function_definition identifier parameters identifier typed_parameter identifier type identifier typed_parameter identifier type identifier typed_parameter identifier type identifier type identifier block raise_statement identifier
Roll-out the environment and return it
def read_cumulative_iss_index(): "Read in the whole cumulative index and return dataframe." indexdir = get_index_dir() path = indexdir / "COISS_2999_index.hdf" try: df = pd.read_hdf(path, "df") except FileNotFoundError: path = indexdir / "cumindex.hdf" df = pd.read_hdf(path, ...
module function_definition identifier parameters block expression_statement string string_start string_content string_end expression_statement assignment identifier call identifier argument_list expression_statement assignment identifier binary_operator identifier string string_start string_content string_end try_state...
Read in the whole cumulative index and return dataframe.
def execute(self, sql): cursor = self.connection.cursor() try: cursor.execute(sql) finally: cursor.close()
module function_definition identifier parameters identifier identifier block expression_statement assignment identifier call attribute attribute identifier identifier identifier argument_list try_statement block expression_statement call attribute identifier identifier argument_list identifier finally_clause block expr...
Execute arbitary SQL against the database.
def get(self, *args, **kwargs): self.before_get(args, kwargs) qs = QSManager(request.args, self.schema) objects_count, objects = self.get_collection(qs, kwargs) schema_kwargs = getattr(self, 'get_schema_kwargs', dict()) schema_kwargs.update({'many': True}) self.before_mar...
module function_definition identifier parameters identifier list_splat_pattern identifier dictionary_splat_pattern identifier block expression_statement call attribute identifier identifier argument_list identifier identifier expression_statement assignment identifier call identifier argument_list attribute identifier ...
Retrieve a collection of objects
def granted(self, lock): unit = hookenv.local_unit() ts = self.requests[unit].get(lock) if ts and self.grants.get(unit, {}).get(lock) == ts: return True return False
module function_definition identifier parameters identifier identifier block expression_statement assignment identifier call attribute identifier identifier argument_list expression_statement assignment identifier call attribute subscript attribute identifier identifier identifier identifier argument_list identifier if...
Return True if a previously requested lock has been granted
def _writeConnections(self, connections, fileObject): for connection in connections: fileObject.write('CONNECT %s %s %s\n' % ( connection.slinkNumber, connection.upSjuncNumber, connection.downSjuncNumber))
module function_definition identifier parameters identifier identifier identifier block for_statement identifier identifier block expression_statement call attribute identifier identifier argument_list binary_operator string string_start string_content escape_sequence string_end tuple attribute identifier identifier at...
Write Connections to File Method
def finalize(state, block): if state.is_METROPOLIS(): br = state.config['BYZANTIUM_BLOCK_REWARD'] nr = state.config['BYZANTIUM_NEPHEW_REWARD'] else: br = state.config['BLOCK_REWARD'] nr = state.config['NEPHEW_REWARD'] delta = int(br + nr * len(block.uncles)) state.delta_b...
module function_definition identifier parameters identifier identifier block if_statement call attribute identifier identifier argument_list block expression_statement assignment identifier subscript attribute identifier identifier string string_start string_content string_end expression_statement assignment identifier...
Apply rewards and commit.
def copy(self): m = QtGui.QMenu() for sm in self.subMenus(): if isinstance(sm, QtGui.QMenu): m.addMenu(sm) else: m.addAction(sm) m.setTitle(self.title()) return m
module function_definition identifier parameters identifier block expression_statement assignment identifier call attribute identifier identifier argument_list for_statement identifier call attribute identifier identifier argument_list block if_statement call identifier argument_list identifier attribute identifier ide...
Adds menus to itself, required by ViewBox
def slice(self, order_by='pk', n=None): if n is not None and n < 0: raise ValueError('slice parameter cannot be negative') queryset = self.order_by(order_by) if n is None: return queryset[0] else: return queryset[0:n]
module function_definition identifier parameters identifier default_parameter identifier string string_start string_content string_end default_parameter identifier none block if_statement boolean_operator comparison_operator identifier none comparison_operator identifier integer block raise_statement call identifier ar...
return n objects according to specified ordering
def prt_gos_grouped(self, prt, **kws_grp): prtfmt = self.datobj.kws['fmtgo'] wrobj = WrXlsxSortedGos(self.name, self.sortobj) desc2nts = self.sortobj.get_desc2nts(**kws_grp) wrobj.prt_txt_desc2nts(prt, desc2nts, prtfmt)
module function_definition identifier parameters identifier identifier dictionary_splat_pattern identifier block expression_statement assignment identifier subscript attribute attribute identifier identifier identifier string string_start string_content string_end expression_statement assignment identifier call identif...
Print grouped GO list.
def all_connections(self): for i in _xrange(self.num_patterns): for c in self._available_connections[i]: yield c for c in self._in_use_connections[i]: yield c
module function_definition identifier parameters identifier block for_statement identifier call identifier argument_list attribute identifier identifier block for_statement identifier subscript attribute identifier identifier identifier block expression_statement yield identifier for_statement identifier subscript attr...
Returns a generator over all current connection objects
def update(self, attrs): data = self.dict() data.update(attrs) heartbeat = Heartbeat(data, self.args, self.configs, _clone=True) return heartbeat
module function_definition identifier parameters identifier identifier block expression_statement assignment identifier call attribute identifier identifier argument_list expression_statement call attribute identifier identifier argument_list identifier expression_statement assignment identifier call identifier argumen...
Return a copy of the current Heartbeat with updated attributes.
def redraw(self): if self._multiscat is not None: self._multiscat._update() self.vispy_widget.canvas.update()
module function_definition identifier parameters identifier block if_statement comparison_operator attribute identifier identifier none block expression_statement call attribute attribute identifier identifier identifier argument_list expression_statement call attribute attribute attribute identifier identifier identif...
Redraw the Vispy canvas
def observe(self, callback, err_callback, duration=60): def observe_callback(value): self.raw = value callback(self) return Command('get', self.path, process_result=observe_callback, err_callback=err_callback, observe=True, ...
module function_definition identifier parameters identifier identifier identifier default_parameter identifier integer block function_definition identifier parameters identifier block expression_statement assignment attribute identifier identifier identifier expression_statement call identifier argument_list identifier...
Observe resource and call callback when updated.
def copy_default_data_file(filename, module=None): if module is None: module = __get_filetypes_module() fullpath = get_default_data_path(filename, module=module) shutil.copy(fullpath, ".")
module function_definition identifier parameters identifier default_parameter identifier none block if_statement comparison_operator identifier none block expression_statement assignment identifier call identifier argument_list expression_statement assignment identifier call identifier argument_list identifier keyword_...
Copies file from default data directory to local directory.
def read(self, size=-1): logger.debug("reading with size: %d", size) if self.response is None: return b'' if size == 0: return b'' elif size < 0 and len(self._read_buffer) == 0: retval = self.response.raw.read() elif size < 0: retva...
module function_definition identifier parameters identifier default_parameter identifier unary_operator integer block expression_statement call attribute identifier identifier argument_list string string_start string_content string_end identifier if_statement comparison_operator attribute identifier identifier none blo...
Mimics the read call to a filehandle object.
def _text_position(size, text, font): width, height = font.getsize(text) left = (size - width) / 2.0 top = (size - height) / 3.0 return left, top
module function_definition identifier parameters identifier identifier identifier block expression_statement assignment pattern_list identifier identifier call attribute identifier identifier argument_list identifier expression_statement assignment identifier binary_operator parenthesized_expression binary_operator ide...
Returns the left-top point where the text should be positioned.
async def sound(dev: Device, target, value): if target and value: click.echo("Setting %s to %s" % (target, value)) click.echo(await dev.set_sound_settings(target, value)) print_settings(await dev.get_sound_settings())
module function_definition identifier parameters typed_parameter identifier type identifier identifier identifier block if_statement boolean_operator identifier identifier block expression_statement call attribute identifier identifier argument_list binary_operator string string_start string_content string_end tuple id...
Get or set sound settings.
def process_rule_info(self): while True: try: event = self._iptq.get(block=False) LOG.debug('Dequeue event: %s.', event) self.update_rule_entry(event) except queue.Empty: self.update_iptables() time.sleep(1) ...
module function_definition identifier parameters identifier block while_statement true block try_statement block expression_statement assignment identifier call attribute attribute identifier identifier identifier argument_list keyword_argument identifier false expression_statement call attribute identifier identifier ...
Task responsible for processing event queue.
def captcha_refresh(request): if not request.is_ajax(): raise Http404 new_key = CaptchaStore.pick() to_json_response = { 'key': new_key, 'image_url': captcha_image_url(new_key), 'audio_url': captcha_audio_url(new_key) if settings.CAPTCHA_FLITE_PATH else None } return ...
module function_definition identifier parameters identifier block if_statement not_operator call attribute identifier identifier argument_list block raise_statement identifier expression_statement assignment identifier call attribute identifier identifier argument_list expression_statement assignment identifier diction...
Return json with new captcha for ajax refresh request
def debracket(string): result = re.sub(BRACKET_RE, ';', str(string)) result = result.lstrip(';') result = result.lstrip(' ') result = result.replace('; ;',';') return result
module function_definition identifier parameters identifier block expression_statement assignment identifier call attribute identifier identifier argument_list identifier string string_start string_content string_end call identifier argument_list identifier expression_statement assignment identifier call attribute iden...
Eliminate the bracketed var names in doc, line strings
def _wrap_key(function, args, kws): return hashlib.md5(pickle.dumps((_from_file(function) + function.__name__, args, kws))).hexdigest()
module function_definition identifier parameters identifier identifier identifier block return_statement call attribute call attribute identifier identifier argument_list call attribute identifier identifier argument_list tuple binary_operator call identifier argument_list identifier attribute identifier identifier ide...
get the key from the function input.
def name(self): self.open() name = lvm_pv_get_name(self.handle) self.close() return name
module function_definition identifier parameters identifier block expression_statement call attribute identifier identifier argument_list expression_statement assignment identifier call identifier argument_list attribute identifier identifier expression_statement call attribute identifier identifier argument_list retur...
Returns the physical volume device path.
def insert_before(self, target): if not target.parent: return target.parent.insert(target.parent.sprites.index(target), self)
module function_definition identifier parameters identifier identifier block if_statement not_operator attribute identifier identifier block return_statement expression_statement call attribute attribute identifier identifier identifier argument_list call attribute attribute attribute identifier identifier identifier i...
insert this widget into the targets parent before the target
def config(ctx): home_directory = os.path.expanduser('~') default_config_file = os.path.join(home_directory, '.tweetqueue') default_database_file = os.path.join(home_directory, '.tweetqueue.db') config = {} config['API_KEY'] = click.prompt('API Key') config['API_SECRET'] = click.prompt('API Secr...
module function_definition identifier parameters identifier block expression_statement assignment identifier call attribute attribute identifier identifier identifier argument_list string string_start string_content string_end expression_statement assignment identifier call attribute attribute identifier identifier ide...
Creates a tweetqueue configuration file
def parse_plist(entry): if is_leaf(entry): url = entry[KEY_URLSTRING] title = entry[KEY_URIDICTIONARY].get('title', url) yield (url, title) elif has_children(entry): for child in entry[KEY_CHILDREN]: for item in parse_plist(child): yield item
module function_definition identifier parameters identifier block if_statement call identifier argument_list identifier block expression_statement assignment identifier subscript identifier identifier expression_statement assignment identifier call attribute subscript identifier identifier identifier argument_list stri...
Parse a XML dictionary entry.
def _printed_len(some_string): return len([x for x in ANSI_ESC_RE.sub('', some_string) if x in string.printable])
module function_definition identifier parameters identifier block return_statement call identifier argument_list list_comprehension identifier for_in_clause identifier call attribute identifier identifier argument_list string string_start string_end identifier if_clause comparison_operator identifier attribute identifi...
Compute the visible length of the string when printed.
def _ondemand(f): name = f.__name__ def func(self, *args, **kwargs): if not args and not kwargs: if hasattr(self, '_%s' % name): return getattr(self, '_%s' % name) a = f(self, *args, **kwargs) setattr(self, '_%s' % name, a) return a ...
module function_definition identifier parameters identifier block expression_statement assignment identifier attribute identifier identifier function_definition identifier parameters identifier list_splat_pattern identifier dictionary_splat_pattern identifier block if_statement boolean_operator not_operator identifier ...
Decorator to only request information if not in cache already.
def configure_logging(level=logging.DEBUG): if level == logging.DEBUG: logging.basicConfig( level=logging.DEBUG, format='%(asctime)s - %(levelname)s - %(message)s' ) return logging logger = logging.getLogger(__name__) logger.setLevel(level) formatter = log...
module function_definition identifier parameters default_parameter identifier attribute identifier identifier block if_statement comparison_operator identifier attribute identifier identifier block expression_statement call attribute identifier identifier argument_list keyword_argument identifier attribute identifier i...
Configure the module logging engine.
def stop(self): if self._thread: _LOGGER.info("Stopping SocketIO thread...") self._running = False if self._exit_event: self._exit_event.set() self._thread.join()
module function_definition identifier parameters identifier block if_statement attribute identifier identifier block expression_statement call attribute identifier identifier argument_list string string_start string_content string_end expression_statement assignment attribute identifier identifier false if_statement at...
Tell the SocketIO thread to terminate.
def update_fname_label(self): filename = to_text_string(self.get_current_filename()) if len(filename) > 100: shorten_filename = u'...' + filename[-100:] else: shorten_filename = filename self.fname_label.setText(shorten_filename)
module function_definition identifier parameters identifier block expression_statement assignment identifier call identifier argument_list call attribute identifier identifier argument_list if_statement comparison_operator call identifier argument_list identifier integer block expression_statement assignment identifier...
Upadte file name label.
def rev(self, rev): d = self.dict d['revision'] = rev return self.from_dict(d)
module function_definition identifier parameters identifier identifier block expression_statement assignment identifier attribute identifier identifier expression_statement assignment subscript identifier string string_start string_content string_end identifier return_statement call attribute identifier identifier argu...
Return a new identity with the given revision
def triplify(self, data, parent=None): if data is None: return if self.is_object: for res in self._triplify_object(data, parent): yield res elif self.is_array: for item in data: for res in self.items.triplify(item, parent): ...
module function_definition identifier parameters identifier identifier default_parameter identifier none block if_statement comparison_operator identifier none block return_statement if_statement attribute identifier identifier block for_statement identifier call attribute identifier identifier argument_list identifier...
Recursively generate statements from the data supplied.
def logout(): from uliweb import request delete_user_session() request.session.delete() request.user = None return True
module function_definition identifier parameters block import_from_statement dotted_name identifier dotted_name identifier expression_statement call identifier argument_list expression_statement call attribute attribute identifier identifier identifier argument_list expression_statement assignment attribute identifier ...
Remove the authenticated user's ID from the request.
def to_dict(self): d = {} for k, v in self.__dict__["data"].iteritems(): if isinstance(v, RecursiveAttribute): d[k] = v.to_dict() else: d[k] = v return d
module function_definition identifier parameters identifier block expression_statement assignment identifier dictionary for_statement pattern_list identifier identifier call attribute subscript attribute identifier identifier string string_start string_content string_end identifier argument_list block if_statement call...
Get an equivalent dict representation.
def updateFontPicker(self): font = self.currentFont() self._fontPickerWidget.setPointSize(font.pointSize()) self._fontPickerWidget.setCurrentFamily(font.family())
module function_definition identifier parameters identifier block expression_statement assignment identifier call attribute identifier identifier argument_list expression_statement call attribute attribute identifier identifier identifier argument_list call attribute identifier identifier argument_list expression_state...
Updates the font picker widget to the current font settings.
def _write_report(report, file_path): with open(file_path, mode='wb') as f: if not isinstance(report, binary_type): report = report.encode('utf-8') f.write(report)
module function_definition identifier parameters identifier identifier block with_statement with_clause with_item as_pattern call identifier argument_list identifier keyword_argument identifier string string_start string_content string_end as_pattern_target identifier block if_statement not_operator call identifier arg...
Write report to the given file path.
def _add_data_to_general_stats(self, data): headers = _get_general_stats_headers() self.general_stats_headers.update(headers) header_names = ('ERROR_count', 'WARNING_count', 'file_validation_status') general_data = dict() for sample in data: general_data[sample] = {column: data[sample][colum...
module function_definition identifier parameters identifier identifier block expression_statement assignment identifier call identifier argument_list expression_statement call attribute attribute identifier identifier identifier argument_list identifier expression_statement assignment identifier tuple string string_sta...
Add data for the general stats in a Picard-module specific manner
def dict_to_switch(d): def lookup(query): return d[query] lookup._always_inline_ = True unrolling_items = unrolling_iterable(d.items()) return lookup
module function_definition identifier parameters identifier block function_definition identifier parameters identifier block return_statement subscript identifier identifier expression_statement assignment attribute identifier identifier true expression_statement assignment identifier call identifier argument_list call...
Convert of dictionary with integer keys to a switch statement.
def chat_delete(self, room_id, msg_id, **kwargs): return self.__call_api_post('chat.delete', roomId=room_id, msgId=msg_id, kwargs=kwargs)
module function_definition identifier parameters identifier identifier identifier dictionary_splat_pattern identifier block return_statement call attribute identifier identifier argument_list string string_start string_content string_end keyword_argument identifier identifier keyword_argument identifier identifier keyw...
Deletes a chat message.
def total_cycles(self) -> int: return sum((int(re.sub(r'\D', '', op)) for op in self.tokens))
module function_definition identifier parameters identifier type identifier block return_statement call identifier argument_list generator_expression call identifier argument_list call attribute identifier identifier argument_list string string_start string_content string_end string string_start string_end identifier f...
The number of total number of cycles in the structure.
def parse_schema(schema): if isinstance(schema, BaseSchema): return schema.validate if type(schema) is type: return _build_type_validator(schema) if isinstance(schema, dict): return _build_dict_validator(schema) if type(schema) in (list, tuple, set): return _build_iterabl...
module function_definition identifier parameters identifier block if_statement call identifier argument_list identifier identifier block return_statement attribute identifier identifier if_statement comparison_operator call identifier argument_list identifier identifier block return_statement call identifier argument_l...
Parse a val schema definition.
def loads(self, src): assert isinstance(src, (unicode_, bytes_)) nodes = self.scan(src.strip()) self.parse(nodes) return ''.join(map(str, nodes))
module function_definition identifier parameters identifier identifier block assert_statement call identifier argument_list identifier tuple identifier identifier expression_statement assignment identifier call attribute identifier identifier argument_list call attribute identifier identifier argument_list expression_s...
Compile css from scss string.
def state(self): ev = self._query_waiters.request(self.__do_query_state) ev.wait(1.0) return self._state
module function_definition identifier parameters identifier block expression_statement assignment identifier call attribute attribute identifier identifier identifier argument_list attribute identifier identifier expression_statement call attribute identifier identifier argument_list float return_statement attribute id...
Returns the current LED state by querying the remote controller.
def commit(self): self.logger.debug("Starting injections...") self.logger.debug("Injections dict is:") self.logger.debug(self.inject_dict) self.logger.debug("Clear list is:") self.logger.debug(self.clear_set) for filename, content in self.inject_dict.items(): ...
module function_definition identifier parameters identifier block expression_statement call attribute attribute identifier identifier identifier argument_list string string_start string_content string_end expression_statement call attribute attribute identifier identifier identifier argument_list string string_start st...
commit the injections desired, overwriting any previous injections in the file.
def process(self): "Process the inner datasets." xp,yp = self.get_processors() for ds,n in zip(self.lists, ['train','valid','test']): ds.process(xp, yp, name=n) for ds in self.lists: if getattr(ds, 'warn', False): warn(ds.warn) return self
module function_definition identifier parameters identifier block expression_statement string string_start string_content string_end expression_statement assignment pattern_list identifier identifier call attribute identifier identifier argument_list for_statement pattern_list identifier identifier call identifier argu...
Process the inner datasets.
def export_setting(self): LOGGER.debug('Export button clicked') home_directory = os.path.expanduser('~') file_name = self.organisation_line_edit.text().replace(' ', '_') file_path, __ = QFileDialog.getSaveFileName( self, self.tr('Export InaSAFE settings'), ...
module function_definition identifier parameters identifier block expression_statement call attribute identifier identifier argument_list string string_start string_content string_end expression_statement assignment identifier call attribute attribute identifier identifier identifier argument_list string string_start s...
Export setting from an existing file.
def write_text_rows(writer, rows): for row in rows: try: writer.writerow(row) except UnicodeEncodeError: new_row = [] for item in row: if isinstance(item, text_type): new_row.append(item.encode('utf-8')) else: ...
module function_definition identifier parameters identifier identifier block for_statement identifier identifier block try_statement block expression_statement call attribute identifier identifier argument_list identifier except_clause identifier block expression_statement assignment identifier list for_statement ident...
Write CSV row data which may include text.
def superpixel(subpix, nside_subpix, nside_superpix): if nside_subpix==nside_superpix: return subpix theta, phi = hp.pix2ang(nside_subpix, subpix) return hp.ang2pix(nside_superpix, theta, phi)
module function_definition identifier parameters identifier identifier identifier block if_statement comparison_operator identifier identifier block return_statement identifier expression_statement assignment pattern_list identifier identifier call attribute identifier identifier argument_list identifier identifier ret...
Return the indices of the super-pixels which contain each of the sub-pixels.
def read_sources(sdmname): sdm = getsdm(sdmname) sourcedict = {} for row in sdm['Field']: src = str(row.fieldName) sourcenum = int(row.sourceId) direction = str(row.referenceDir) (ra,dec) = [float(val) for val in direction.split(' ')[3:]] sourcedict[sourcenum] = {} ...
module function_definition identifier parameters identifier block expression_statement assignment identifier call identifier argument_list identifier expression_statement assignment identifier dictionary for_statement identifier subscript identifier string string_start string_content string_end block expression_stateme...
Use sdmpy to get all sources and ra,dec per scan as dict
def find_in_cache(cacheKey): if cacheKey: data = cache.get('plugit-cache-' + cacheKey, None) if data: return (data['result'], data['menu'], data['context']) return (None, None, None)
module function_definition identifier parameters identifier block if_statement identifier block expression_statement assignment identifier call attribute identifier identifier argument_list binary_operator string string_start string_content string_end identifier none if_statement identifier block return_statement tuple...
Check if the content exists in cache and return it
def finish_scan(self, scan_id): self.set_scan_progress(scan_id, 100) self.set_scan_status(scan_id, ScanStatus.FINISHED) logger.info("%s: Scan finished.", scan_id)
module function_definition identifier parameters identifier identifier block expression_statement call attribute identifier identifier argument_list identifier integer expression_statement call attribute identifier identifier argument_list identifier attribute identifier identifier expression_statement call attribute i...
Sets a scan as finished.
def _skip_trampoline(handler): data_event, self = (yield None) delegate = handler event = None depth = 0 while True: def pass_through(): _trans = delegate.send(Transition(data_event, delegate)) return _trans, _trans.delegate, _trans.event if data_event is not ...
module function_definition identifier parameters identifier block expression_statement assignment pattern_list identifier identifier parenthesized_expression yield none expression_statement assignment identifier identifier expression_statement assignment identifier none expression_statement assignment identifier intege...
Intercepts events from container handlers, emitting them only if they should not be skipped.
def _filesec(self, files=None): if files is None: files = self.all_files() filesec = etree.Element(utils.lxmlns("mets") + "fileSec") filegrps = {} for file_ in files: if file_.type.lower() not in ("item", AIP_ENTRY_TYPE): continue fileg...
module function_definition identifier parameters identifier default_parameter identifier none block if_statement comparison_operator identifier none block expression_statement assignment identifier call attribute identifier identifier argument_list expression_statement assignment identifier call attribute identifier id...
Returns fileSec Element containing all files grouped by use.
def content(self): raw_content = self._manager.api.session.get(self.download_link).content data = BytesIO(raw_content) archive = ZipFile(data) filename = archive.filelist[0] return archive.read(filename)
module function_definition identifier parameters identifier block expression_statement assignment identifier attribute call attribute attribute attribute attribute identifier identifier identifier identifier identifier argument_list attribute identifier identifier identifier expression_statement assignment identifier c...
Returns raw CSV content of the log file.
def sendEmail(self, subject, body, toAddress=False): if not toAddress: toAddress = self.toAddress toAddress = toAddress.split(';') message = MIMEText(body) message['Subject'] = subject message['From'] = self.fromAddress message['To'] = ','.join(toAddress) ...
module function_definition identifier parameters identifier identifier identifier default_parameter identifier false block if_statement not_operator identifier block expression_statement assignment identifier attribute identifier identifier expression_statement assignment identifier call attribute identifier identifier...
sends an email using the agrcpythonemailer@gmail.com account
def send(self): if self.status is OUTWARD_STATUS.get('sent'): return False recipients = self.get_recipients() emails = [] if OUTWARD_HTML: html_content = self.message EmailClass = EmailMultiAlternatives else: EmailClass = EmailMessa...
module function_definition identifier parameters identifier block if_statement comparison_operator attribute identifier identifier call attribute identifier identifier argument_list string string_start string_content string_end block return_statement false expression_statement assignment identifier call attribute ident...
Sends the email to the recipients
def zPushLens(self, update=None, timeout=None): reply = None if update == 1: reply = self._sendDDEcommand('PushLens,1', timeout) elif update == 0 or update is None: reply = self._sendDDEcommand('PushLens,0', timeout) else: raise ValueError('Invalid val...
module function_definition identifier parameters identifier default_parameter identifier none default_parameter identifier none block expression_statement assignment identifier none if_statement comparison_operator identifier integer block expression_statement assignment identifier call attribute identifier identifier ...
Copy lens in the Zemax DDE server into LDE
def bootstrapify(self): if self.__htmltree is None: self.__make_tree() self.__htmltree.find('head').append( E.LINK(rel="stylesheet", href="//maxcdn.bootstrapcdn.com/bootstrap/3.3.1/css/bootstrap.min.css", type="text/css")) for ...
module function_definition identifier parameters identifier block if_statement comparison_operator attribute identifier identifier none block expression_statement call attribute identifier identifier argument_list expression_statement call attribute call attribute attribute identifier identifier identifier argument_lis...
Add bootstrap cdn to headers of html
def compile_with_value(self, func, args=None, owner=None): if args is None: args = [] theano_args = [self.cast2theano_var(a, 'extheano.jit.Compiler-arg-%d' % i) for a, i in zip(args, range(len(args)))] return self.compile_with_symbol(func, theano_args, owner)
module function_definition identifier parameters identifier identifier default_parameter identifier none default_parameter identifier none block if_statement comparison_operator identifier none block expression_statement assignment identifier list expression_statement assignment identifier list_comprehension call attri...
Compile the function with array-like objects
def getIndex(folderPath=None): try: return cache.structure except AttributeError: pass if folderPath == None: from sc2maptool.startup import setup folderPath = setup() def folderSearch(path, attrList=[]): ret = [] for item in glob(os.path.join(path, '*')): ...
module function_definition identifier parameters default_parameter identifier none block try_statement block return_statement attribute identifier identifier except_clause identifier block pass_statement if_statement comparison_operator identifier none block import_from_statement dotted_name identifier identifier dotte...
parse the 'Maps' subfolder directory divining criteria for valid maps
def _save_config(section, token, value): cmd = NIRTCFG_PATH cmd += ' --set section={0},token=\'{1}\',value=\'{2}\''.format(section, token, value) if __salt__['cmd.run_all'](cmd)['retcode'] != 0: exc_msg = 'Error: could not set {} to {} for {}\n'.format(token, value, section) raise salt.excep...
module function_definition identifier parameters identifier identifier identifier block expression_statement assignment identifier identifier expression_statement augmented_assignment identifier call attribute string string_start string_content escape_sequence escape_sequence escape_sequence escape_sequence string_end ...
Helper function to persist a configuration in the ini file
def generateSteps(self, minStep): self.checkFinite(minStep) if self.binary: base = 2.0 mantissas = [1.0] exponent = math.floor(math.log(minStep, 2) - EPSILON) else: base = 10.0 mantissas = [1.0, 2.0, 5.0] exponent = math.flo...
module function_definition identifier parameters identifier identifier block expression_statement call attribute identifier identifier argument_list identifier if_statement attribute identifier identifier block expression_statement assignment identifier float expression_statement assignment identifier list float expres...
Generate allowed steps with step >= minStep in increasing order.
def divisors(n): for i in range(1, int(math.sqrt(n) + 1)): if n % i == 0: yield i if i*i != n: yield n / i
module function_definition identifier parameters identifier block for_statement identifier call identifier argument_list integer call identifier argument_list binary_operator call attribute identifier identifier argument_list identifier integer block if_statement comparison_operator binary_operator identifier identifie...
Generate the divisors of n
def runGetRnaQuantificationSet(self, id_): compoundId = datamodel.RnaQuantificationSetCompoundId.parse(id_) dataset = self.getDataRepository().getDataset(compoundId.dataset_id) rnaQuantificationSet = dataset.getRnaQuantificationSet(id_) return self.runGetRequest(rnaQuantificationSet)
module function_definition identifier parameters identifier identifier block expression_statement assignment identifier call attribute attribute identifier identifier identifier argument_list identifier expression_statement assignment identifier call attribute call attribute identifier identifier argument_list identifi...
Runs a getRnaQuantificationSet request for the specified ID.
def cached(func): ret = None def call_or_cache(*args, **kwargs): nonlocal ret if ret is None: ret = func(*args, **kwargs) return ret return call_or_cache
module function_definition identifier parameters identifier block expression_statement assignment identifier none function_definition identifier parameters list_splat_pattern identifier dictionary_splat_pattern identifier block nonlocal_statement identifier if_statement comparison_operator identifier none block express...
Memoize a function result.
def _zeros(ftype, *dims): shape = _dims2shape(*dims) objs = [ftype.box(0) for _ in range(_volume(shape))] return farray(objs, shape, ftype)
module function_definition identifier parameters identifier list_splat_pattern identifier block expression_statement assignment identifier call identifier argument_list list_splat identifier expression_statement assignment identifier list_comprehension call attribute identifier identifier argument_list integer for_in_c...
Return a new farray filled with zeros.
async def get_schemes(self) -> List[Scheme]: return [ Scheme.make(**x) for x in await self.services["avContent"]["getSchemeList"]() ]
module function_definition identifier parameters identifier type generic_type identifier type_parameter type identifier block return_statement list_comprehension call attribute identifier identifier argument_list dictionary_splat identifier for_in_clause identifier await call subscript subscript attribute identifier id...
Return supported uri schemes.
def write_http_request(self, path: str, headers: Headers) -> None: self.path = path self.request_headers = headers logger.debug("%s > GET %s HTTP/1.1", self.side, path) logger.debug("%s > %r", self.side, headers) request = f"GET {path} HTTP/1.1\r\n" request += str(headers...
module function_definition identifier parameters identifier typed_parameter identifier type identifier typed_parameter identifier type identifier type none block expression_statement assignment attribute identifier identifier identifier expression_statement assignment attribute identifier identifier identifier expressi...
Write request line and headers to the HTTP request.
def validate(self): super().validate() nb_entities = len(self.entities) if nb_entities != self.rows + self.columns: raise self.error( 'Number of entities: %s != number of rows + ' 'number of columns: %s+%s=%s' % ( nb_entities, self....
module function_definition identifier parameters identifier block expression_statement call attribute call identifier argument_list identifier argument_list expression_statement assignment identifier call identifier argument_list attribute identifier identifier if_statement comparison_operator identifier binary_operato...
Base validation + entities = rows + columns.
def retrieve_extension(self, name, **kw): response = self.request(E.retrieveExtensionRequest( E.name(name), E.withDescription(int(kw.get('with_description', 0))), E.withPrice(int(kw.get('with_price', 0))), E.withUsageCount(int(kw.get('with_usage_count', 0))), ...
module function_definition identifier parameters identifier identifier dictionary_splat_pattern identifier block expression_statement assignment identifier call attribute identifier identifier argument_list call attribute identifier identifier argument_list call attribute identifier identifier argument_list identifier ...
Retrieve details on a single extension.